Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g1401 | ATGGCAACTTCAAGTTTTCCCCCTTCTTTTTCATCCCTCTCCGTAATTCTTCCCCTTCAGAATCATACACCCAACAAATTTTTATCATTCCCTTCGAAGCTTTCGAAACCCCACTTGCAATTCCACAGAATCTGCTGCGGAATGCCTGAGACTGGGGTTCGGCAAAACCCCACAAGCGGCGGAGCTTCCACTTCCAGGAACAGCACGGAGATGTACAATATGACTATGAAGAAGATGATGAAGAACCCTTATGAGTATCACCATGAACTGGGTATGAACTATACTGTGATAGCTGACAATTTGATTGTCGGTTCCCAGCCTCAAAAACCCAAAGATATCGATTTCTTGAAGGAGGAAGAAGGTGTTGCCTATATTCTGAATTTACAGCAGGACAAGGATGTTGAGTATTGGGGAGTCGACTTACGATCAATTATAGAAAGATGTAAAGAACTTGGAATTCATCATATGAGGAAACCGGCAAGAGATTTTGATCCAGATTCCATGAGAAATGGATTACCTAAAGCTGTTTCCTTGCTAGAATGGGCGATCTCGGAGGGTAAAGGAAAAGTTTATGTCCATTGCACCGCTGGACTAGGAAGGGCTCCTGCCGTTGCAATAGCTTACTTGTTCTGGTTTTGTGGAATGAATTTAAATACCGCATATGAAGCACTGACCTCGAAGCGACCTTGTGGACCGAGTAAAAGAGCGATTCGTGGAGCCACATACGATCTATGTAAAACAGATCAATGGAAGGAGCCATTCGAGAGCCTTCCCGACAATGCATTTGAAGGTGTTGCAGATTGGGAGAGAAACTTGATTCAGGATCGGCTCTATTTGGACTATCATGATTTCGACCTGGAATTGGTCGAGGAAATCAAAATAGGTAGTTGTTCGTGGTAA | 900 | 43.67 | MATSSFPPSFSSLSVILPLQNHTPNKFLSFPSKLSKPHLQFHRICCGMPETGVRQNPTSGGASTSRNSTEMYNMTMKKMMKNPYEYHHELGMNYTVIADNLIVGSQPQKPKDIDFLKEEEGVAYILNLQQDKDVEYWGVDLRSIIERCKELGIHHMRKPARDFDPDSMRNGLPKAVSLLEWAISEGKGKVYVHCTAGLGRAPAVAIAYLFWFCGMNLNTAYEALTSKRPCGPSKRAIRGATYDLCKTDQWKEPFESLPDNAFEGVADWERNLIQDRLYLDYHDFDLELVEEIKIGSCSW | 299 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 16441404 | 16446900 | + | MC09g1055 | Mch9g1401 | 698283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g1401 | 299 | Gene3D | Protein tyrosine phosphatase superfamily | 76 | 280 | IPR029021 | - | |
| Mch9g1401 | 299 | SMART | dsp_5 | 93 | 243 | IPR020422 | GO:0006470(InterPro) | |
| Mch9g1401 | 299 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 85 | 233 | IPR029021 | - | |
| Mch9g1401 | 299 | CDD | DSP_laforin-like | 92 | 239 | IPR045204 | GO:0019203(InterPro) | |
| Mch9g1401 | 299 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 61 | 256 | IPR052832 | GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER) | |
| Mch9g1401 | 299 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 93 | 253 | IPR020422 | GO:0006470(InterPro) | |
| Mch9g1401 | 299 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 170 | 229 | IPR000387 | GO:0016311(InterPro) | |
| Mch9g1401 | 299 | FunFam | Phosphoglucan phosphatase LSF2, chloroplastic | 76 | 281 | - | - | |
| Mch9g1401 | 299 | Pfam | Dual specificity phosphatase, catalytic domain | 116 | 230 | IPR000340 | GO:0016311(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch9g1401 | Mch-Chr9:16441404 | Mch9g1831 | Mch-Chr9:20091929 | 1.13E-46 | dispersed |
Pathway information