Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1468 ATGACGAAATTGCCCTCCCCCACCGCCGTTGCCGCCGCCGTGGCCCTCACCGTCGTCGTTTTCTCTCTCCTCCCTCCGACCGATGCTCTCGGCTCTGCCTCCACGCTCGCCGTCAGCTACGGTTCCGGCACTATCTGCGGCATCGTCGCCGAGCAGCCGACGCAGCGGATTCTCTGCTTCCGAGACGGTCAAACCATTTTGATTGAACCAAATATCTCCTTCTCCGCCGTCTCCGGCGGCCGGAATGGATTCTGCGGCATAAGGGCCGGCGGCTACAGCCTCCTCTGCTGGGATTTCGACTCTGTGACCTCCACGTTTTCCCCTAAGAGAATTTATTACAGCACTACCGTTCTCCTCGAGAATCTCGCCGTCGGAGACGACCAAATCTGCGCGACGGCGGCCGGCGCCGGCAATGTAACTTGCTGGCGGGAAGGTAACGACGGGGGAGTTGCAGTTTTGCCTCTTCAATTCGATTCAATTTCTTCTGGGTTTGGGTTTTCTTGCGGGATTTTGAGGAATAATCGATCGATTCGATGTTGGGGTAGAAATTCATCGATTGCTACCCAAATCGAAAATGGGTTTAGGAACATTTCAATGTCGAGCATCGCCGCCGGGGGGTCTCACGCCTGCGGATTGAATTCCTCCGGTGGGTTGGTTTGTAGAGGAATCAACGATTCTGGGCAGCTGGATTTTCCTTCAAATTTATCCATGGCGCTCTCCGAACTGGCCCTCGGAGCCCGCCATAGCTGCGGGATTCTGCTCTCGAATCGATCGGTGGTCTGTTGGGGTGGCGGAGGGGAATTTTCCGTCGATTCCGCCGAAGAAACTTCGTTTGAATTAATTTCTTCGGGATCCGATTTCGTCTGTGGATTAACGACGAGAAATTTCTCTGTATTATGTTGGGGGCCGGGTTTATCGAATTCCTCTGGTTTTTTTTCACTCTCTCTTCCGAAGATTCTCCCTGGTCCTTGTGTTCAATCTTCTTGTAGCGACTGTGGGGTTTATCCTCTGTCTCAAACCCTCTGTTCTGGCTCTGGAAATGTCTGTAGTCGCTGCTGGGTTCCTGCTCCAGCGCCGCCGTCTCCTCCACTGCCTCCGCCTCCGCCTCCGCCACCAATGGCGGCGACCCCATCTCCTCCTCCGGCCGCCCTGAAAAAGGGTTTGTTGGCATTCGCCATAGTTGGCTCAGTTGGGGCCTTTGCTGGGATTTGTACTGTTATATACTGTTTATGGACTGGTGTTTGTTTTGGGCATAAGAAGATTCACAATTCAGTTCAGCCCACCATCACTAGAGCCGCCAGCTCCAACGGCGGAACGACGACCTCGAACACGAACAACAGCCCGCCGTCAAGGTCATTGACGATCAGGCGCCAGGGCTCCCGAATAATGCGGAGGCAGAGGAGCGGCACCTCGTCGAAGCACACAGAGAGAGCAGAGGAATTCACTCTATCCGAGCTTGCCATGGCCACCAACGACTTCTCCCTCGAGAACAAGATCGGCGAGGGGAGCTTCGGCGTCGTGTACCGGGGGAAACTCTCCGACGGGCGCGAAGTCGCGATCAAGAGAGGCGAAACGGGGCCGAAAACGAAGAAGTTTCAGGAGAAGGAGAGTGCATTTGAATCAGAATTGGCATTCTTGTCTAGGCTTCACCACAAGCATTTGGTGAGGCTTGTTGGGTTTTGTGAGGAGAAAGATGAGAGGCTGTTGGTTTATGAGTATATGAAAAATGGGGCTCTTTATAATCATCTTCATGACAAGAACAACTCTGAAAAAGCCAGTAGCCTTGTAAACTCTTGGAAAATGAGGATCAAAATTGCTTTAGATGCAGCTAGAGGAATTGAATATCTTCACAATTATGCAGTCCCTCCCATCATCCACAGAGACATCAAATCCTCCAACATTCTCCTCGACTCGAATTGGACGGCGAGAGTGTCTGATTTCGGGTTGTCGTTGATGAGTCCGGGGTCGGATCGTGACTTCCGACCCACGAAGGCAGCTGGGACAGTTGGTTATATTGATCCTGAGTACTATGGATTGAATGTTTTGACTGCTAAGAGCGATGTGTATGGTCTTGGGGTGGTGTTGTTGGAGCTTTTGACAGGGAAGAGAGCTATATTCAAGGATGATGAACAGGGAGGGACGCCTGTGAGCGTTGTCGATTTTGCGGTGCCTGTGATTATGGTTGGGGAACTGGTGAAGATCTTGGATCAGAGGGTCGGGCCACCGCAGTTGAACGAAGCGGAGGCTGTGGAGCTGGTGGCTTACACGGCGATGCATTGCGTGCATTTGGAAGGGAAAGACCGCCCGACGATGACCGACATTGTCGCTAATTTGGAGCGAGCTTTGAACCTCTGTGATGATAGCCATGGCAGCATCTCTAGTGGTGGAATTTCCATTGTTTCAGAG 2406 52.66 MTKLPSPTAVAAAVALTVVVFSLLPPTDALGSASTLAVSYGSGTICGIVAEQPTQRILCFRDGQTILIEPNISFSAVSGGRNGFCGIRAGGYSLLCWDFDSVTSTFSPKRIYYSTTVLLENLAVGDDQICATAAGAGNVTCWREGNDGGVAVLPLQFDSISSGFGFSCGILRNNRSIRCWGRNSSIATQIENGFRNISMSSIAAGGSHACGLNSSGGLVCRGINDSGQLDFPSNLSMALSELALGARHSCGILLSNRSVVCWGGGGEFSVDSAEETSFELISSGSDFVCGLTTRNFSVLCWGPGLSNSSGFFSLSLPKILPGPCVQSSCSDCGVYPLSQTLCSGSGNVCSRCWVPAPAPPSPPLPPPPPPPPMAATPSPPPAALKKGLLAFAIVGSVGAFAGICTVIYCLWTGVCFGHKKIHNSVQPTITRAASSNGGTTTSNTNNSPPSRSLTIRRQGSRIMRRQRSGTSSKHTERAEEFTLSELAMATNDFSLENKIGEGSFGVVYRGKLSDGREVAIKRGETGPKTKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYNHLHDKNNSEKASSLVNSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWTARVSDFGLSLMSPGSDRDFRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDDEQGGTPVSVVDFAVPVIMVGELVKILDQRVGPPQLNEAEAVELVAYTAMHCVHLEGKDRPTMTDIVANLERALNLCDDSHGSISSGGISIVSE 802
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17112653 17115058 + MC09g1112 Mch9g1468 698350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1468 802 Gene3D Phosphorylase Kinase; domain 1 455 573 - -
Mch9g1468 802 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524(InterPro)
Mch9g1468 802 FunFam serine/threonine-protein kinase-like protein CCR1 462 573 - -
Mch9g1468 802 Gene3D Transferase(Phosphotransferase) domain 1 574 791 - -
Mch9g1468 802 SUPERFAMILY Protein kinase-like (PK-like) 472 778 IPR011009 -
Mch9g1468 802 MobiDBLite consensus disorder prediction 432 477 - -
Mch9g1468 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g1468 802 Pfam Regulator of chromosome condensation (RCC1) repeat 159 184 - -
Mch9g1468 802 Pfam Regulator of chromosome condensation (RCC1) repeat 201 228 - -
Mch9g1468 802 FunFam Serine/threonine-protein kinase-like protein CCR4 574 794 - -
Mch9g1468 802 MobiDBLite consensus disorder prediction 432 457 - -
Mch9g1468 802 Gene3D - 119 353 IPR009091 -
Mch9g1468 802 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 33 792 IPR044815 GO:0004674(InterPro)
Mch9g1468 802 SUPERFAMILY RCC1/BLIP-II 65 265 IPR009091 -
Mch9g1468 802 ProSiteProfiles Protein kinase domain profile. 493 782 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1468 802 SMART serkin_6 493 782 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1468 802 Pfam Protein kinase domain 494 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1591 Mch-Chr11:14119731 Mch9g1468 Mch-Chr9:17112653 5.42E-120 dispersed
Mch3g0103 Mch-Chr3:1272145 Mch9g1468 Mch-Chr9:17112653 5.66E-201 dispersed
Mch5g0932 Mch-Chr5:6895834 Mch9g1468 Mch-Chr9:17112653 6.51E-96 dispersed
Mch9g1468 Mch-Chr9:17112653 Mch9g2331 Mch-Chr9:23373781 1.01E-64 dispersed
Mch9g1468 Mch-Chr9:17112653 Mch9g2017 Mch-Chr9:21439862 3.89E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77701 PF00069 Pkinase 7.40E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1468 - - - 0.0