Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1489 ATGGAAGGGAAGGAGGAGGATGTGAGACTAGGAGCGAACAAGTTCAACGAGAGGCAGCCGATTGGGACGGCGGCGCAGAGCCAAGACGATGCGAAGGACTACAAGGAGCCACCGCCGGCGCCGCTGTTCGAGGCGGAGGAGCTGACTTCGTGGTCGTTTTACAGAGCTGGAATCGCCGAGTTCATCGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACCGTCATGGGCGTCGCCCGCACCAACGAGGCCAAAGGCAACAGCTGCGGCACCGTCGGAATCCAGGGCATCGCCTGGGCCTTCGGCGGCATGATCTTCGCCCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATTAACCCCGCCGTCACCTTCGGCCTCTTCCTCGCCAGGAAGCTGTCCTTGACAAGGGCCATCTTTTACATCGTGATGCAGTGCCTCGGCGCCATCTGCGGCGCCGGCGTCGTCAAGGGCTTCCAACCCAAGCCCTATGAGAGGCTCAACGGCGGAGCTAACATGGTCGCCGCCGGCTACACTAAAGGCGACGGCCTCGGCGCCGAGATTGTCGGCACCTTCATCCTCGTTTACACCGTCTTCTCCGCCACCGACGCCAAACGTAGCGCCAGAGACTCCCACGTTCCGATTTTGGCTCCCCTACCAATTGGGTTCGCCGTGTTCTTGGTTCACCTGGCCACAATTCCGATCACCGGCACCGGCATCAACCCGGCCCGGAGCTTGGGCGCCGCCATCATCTTCAACAAGGACAAAGGCTGGGACGACCACTGGATTTTCTGGGTCGGACCCTTCATCGGCGCCGCGCTGGCCGCTCTGTACCACCAAGTCGTGATCAGAGCCATCCCCTTCAAGTCCAAGTGA 879 61.32 MEGKEEDVRLGANKFNERQPIGTAAQSQDDAKDYKEPPPAPLFEAEELTSWSFYRAGIAEFIATFLFLYITVLTVMGVARTNEAKGNSCGTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPKPYERLNGGANMVAAGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDKGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17287242 17288822 + MC09g_new0360 Mch9g1489 698371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1489 292 Gene3D Glycerol uptake facilitator protein. 40 291 IPR023271 -
Mch9g1489 292 NCBIfam MIP family channel protein 59 280 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1489 292 CDD MIP 55 283 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1489 292 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 291 IPR034294 GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER)
Mch9g1489 292 MobiDBLite consensus disorder prediction 1 36 - -
Mch9g1489 292 Pfam Major intrinsic protein 47 280 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1489 292 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1489 292 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1489 292 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1489 292 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1489 292 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1489 292 PRINTS Major intrinsic protein family signature 187 205 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1489 292 SUPERFAMILY Aquaporin-like 47 285 IPR023271 -
Mch9g1489 292 FunFam Probable aquaporin PIP1-2 40 292 - -
Mch9g1489 292 ProSitePatterns MIP family signature. 119 127 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2057 Mch-Chr4:22803334 Mch9g1489 Mch-Chr9:17287242 2.34E-135 dispersed
Mch5g1752 Mch-Chr5:18123479 Mch9g1489 Mch-Chr9:17287242 1.63E-124 dispersed
Mch5g1920 Mch-Chr5:19135298 Mch9g1489 Mch-Chr9:17287242 4.60E-167 dispersed
Mch6g2400 Mch-Chr6:25918660 Mch9g1489 Mch-Chr9:17287242 7.99E-180 dispersed
Mch8g2271 Mch-Chr8:25844295 Mch9g1489 Mch-Chr9:17287242 2.59E-16 dispersed
Mch9g1489 Mch-Chr9:17287242 Mch9g1784 Mch-Chr9:19720111 3.69E-137 dispersed
Mch9g1488 Mch-Chr9:17282187 Mch9g1489 Mch-Chr9:17287242 2.08E-202 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1489 K09872 - csv:101215145 560.836