Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1572 ATGGAGGGTTTTCTGAAGATCTTGGGTGTGGCAAAGCCCTATGTGGGTGTTGTTTTTGTGCAATTTGGGTATGCTGGAATGGCCATTCTTGCAAAGTCAGCTCTCGACCAAGGCATGAGCCAACATGTCTTCGTCGTTTATCGACACGCTGTGGCTACTCTTCTCATTGCCCCTTTCGCCATCGTCTTCGATAGTTTTCGATTATATCGTTTATTCATATTCTTTAACGTTGCATGCAGGAAAGTGAGGACGAAGATGACATTTTCGCTATTCATGAAGATTGTGATGCTCGGTTTATTAGAGCCGGTGATCGATCAGAACTTGTACTATACCGGTATGAAGTTGACAACAGCAACCTTTACAGCTGCCATGTGCAATATTTTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAATGGGAAGCCAAGCAAAAATCTTAGGGACCATAGTGACAGTAGGAGGAGCCATGGTTATGACCTTCATAAGAGGTCCCATGTTGAATCTGCCATGGACAAGCCACAACCAGCTCTCTGCTTCTTCTTCAAGTGCTTCTGCTGCAATTCACCAAGACCCTCTAAAGGGCTCCCTCATTATTGCATCTGGCTGCATTTGCTGGTCAGCTTTCATCATTCTCCAGGCTATTACGCTGAAAGCGTACCCCGCGGAGCTGTCGCTCACGGCGTTGATATGCTTGGTGGGAACCATTGGAGGCTCTGTGGTGGCTTTGGTCATGGACAGGGGGAACCCTGCTGCTTGGTCTTTGCACTTTGACAGCCAACTTCTGGCTATTGTTTATTCTGGAATAATATGTTCAGGGGTAACTTATTACATTCAAGGAGTGGTGATGCAGACAAAAGGACCTGTTTTTGTCACTGCATTCAGTCCTCTGAGCATGATTTTAGTTGCAATTATGAGCTCCTTCATCCTATCTGAGATAATGTTCTTGGGCAGGGTTATTGGGGCAGTAGCCATTATCGCTGGCTTGTACCTGGTTTTGTGGGGACAAAGCAAAGATCAGCTTTCAGTTAAATCCGGCTGTGATAAGGTAACACCTTGTGAGCAACAGATGACTGGAAAGGATGAGGCTTCGACGACCACGATGGTTCAACCGAGTCGAGAGTTCCTGGTGCTTGATGTTGATAAAGAGACAAATTGA 1185 45.82 MEGFLKILGVAKPYVGVVFVQFGYAGMAILAKSALDQGMSQHVFVVYRHAVATLLIAPFAIVFDSFRLYRLFIFFNVACRKVRTKMTFSLFMKIVMLGLLEPVIDQNLYYTGMKLTTATFTAAMCNILPAFAFLMAWACRLEKVNILKMGSQAKILGTIVTVGGAMVMTFIRGPMLNLPWTSHNQLSASSSSASAAIHQDPLKGSLIIASGCICWSAFIILQAITLKAYPAELSLTALICLVGTIGGSVVALVMDRGNPAAWSLHFDSQLLAIVYSGIICSGVTYYIQGVVMQTKGPVFVTAFSPLSMILVAIMSSFILSEIMFLGRVIGAVAIIAGLYLVLWGQSKDQLSVKSGCDKVTPCEQQMTGKDEASTTTMVQPSREFLVLDVDKETN 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17986224 17990219 + MC09g1191 Mch9g1572 698454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1572 394 Pfam EamA-like transporter family 203 342 IPR000620 GO:0016020(InterPro)
Mch9g1572 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 169 - -
Mch9g1572 394 PANTHER WAT1-RELATED PROTEIN 16 358 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch9g1572 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 266 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2115 Mch-Chr4:23216640 Mch9g1572 Mch-Chr9:17986224 5.19E-97 dispersed
Mch4g2116 Mch-Chr4:23226066 Mch9g1572 Mch-Chr9:17986224 1.71E-97 dispersed
Mch9g1572 Mch-Chr9:17986224 Mch9g1707 Mch-Chr9:19031676 8.95E-96 dispersed
Mch1g0746 Mch-Chr1:11284866 Mch9g1572 Mch-Chr9:17986224 3.92E-137 wgd
Mch4g2113 Mch-Chr4:23195641 Mch9g1572 Mch-Chr9:17986224 6.28E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1572 - - - 0.0