Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1604 TTCTCCCACTCTTCTCCCTCCAAAACCCTCCACTCATCTTCTTCTTTTCCCAGCTCCGGCCACCGGACTCCGCCGTCCACCTATGACCCTTCCCTGTCCGCCGCCATGGAAGAAACCATCGTTAACGCCGAACCCATCATCACCAAATGGGACCCCGATTCCTCCGAGTTCAACAGAGTCACCTTCCTCTTCCGCCATGGCAGGGCCGAGTCCGACGAGTTTCTCACCTCCGTCAACAACCTCCGCCGGGCGATGGACTTTTTCATTTCCGAAAATTCTACCTCCGCCGTCCTTATTCTCGCCCAGAAATTGATGCAGGCCGCCATGAGACGCCTCGAGAAGGAGTTTTATTATATTCTGAGTGAGAATCGGCAGCATCTGGACCCGGAATCCGTCTCCAGCCGGTCCTCCGACGGGGAGATCGCCGGGGATTCTGCGACGGAGCTCGACAGGGTCGCGGCGGAGTTGAGATCGATTGCGGATTGTATGATCGGCTCTGGGTATGGGAAAGAGTGTGTGAAGATTTACAAAGTGATCAGAAAATCGATTGTCGATGAAACTCTATACCGTCTTGGAACAGAGCGGTTCAAGGCTTCGCGGATTCAGAGATTGAATTGGGAATCGCTCGAGACCGTGATCAGGAGCTGGATGAATTCCATAAAGGTTGCTGTGAATACTCTGTTTCGTGGGGAGAAAATTCTCTGCGATCATGTTTTTTCAAAATCCGGCAGAATTGGAAAGTCCTGTTTCTGGGAGATCACAAAAGAAGGGGCGATCACTCTGTTTAAATTCCCGGAGTTGATCGCGAAAGGGAAGAAAGATTCAGAGAAGATTTTCTTGTTGATGGAGCTTTACGAGGCGAATTCCGACGTCTTGCCGGAAATCGAGGTCGTATTCGACTCTGTTTCGACGGAAACCATTAAAGCGCAAGCGGAAGCTTCGTTGGTCAAACTCGCGGAGGCAATCCGCGCCATTCTCTCCGATTTCGAATCGACGATCCAGAAGAATTCCTCCAAAACTCCGGCTCCCGGCGGCGGAATCCACCCGCTGACCCGATCGGCGATGAATTACATCTCCTCTCTCGGAGACTACGGCGGGATTCTCTCCGACATCATCACCGAAAACTCTCCGATTCCGAGTTCGTACACGGAGACTCTCGCCGCCGACGACGCGCTGTCGTCGCCGGTGGCGGCGCAACTCGGGTGGCTGATTCTGGTCCTCCTCTGCAAACTCGACACGAAAGCAGAGCTTTACAGAGACGTATCGCTGTCGTACCTGTTCCTCGCGAACAACCTGAATTTCATCGTGAGGACGGTGACGGCGACGAATCTGAAATCCCTCGTCGGCGGCGAGTGGGTGGCGAACCACGCGAGCAAGGTGAAGCTGTACGCGTCGAATTACGAGGCGACGGCGTGGAACAGGGTGGTGGGGACGCTGCCGGAGAGGAGCTCGCCGGAAATGGAGTCGCCGGAGGCGGCGAAGGAGGGGTTGAGGAAATTCAACGCGGCGTTCGAAGAGGCGTACCGGAAACAGACGTCGTGGAGAGTGGAGGAGGGGCGGCTGAGGGACGAGTTGAAGATGTCGATAGCGAAGAAGCTGCTGCCGACATATCGGCAGTTCTACGAGGGGTGCATTGAGATAGTGGGTGGGGAGAGAGATTTTTCGACGAAAGGGTTTGCTGTCAGGTTTACGCCTGACGATTTGGGAAACTACTTGTCGGATTTGTTC 1728 54.51 FSHSSPSKTLHSSSSFPSSGHRTPPSTYDPSLSAAMEETIVNAEPIITKWDPDSSEFNRVTFLFRHGRAESDEFLTSVNNLRRAMDFFISENSTSAVLILAQKLMQAAMRRLEKEFYYILSENRQHLDPESVSSRSSDGEIAGDSATELDRVAAELRSIADCMIGSGYGKECVKIYKVIRKSIVDETLYRLGTERFKASRIQRLNWESLETVIRSWMNSIKVAVNTLFRGEKILCDHVFSKSGRIGKSCFWEITKEGAITLFKFPELIAKGKKDSEKIFLLMELYEANSDVLPEIEVVFDSVSTETIKAQAEASLVKLAEAIRAILSDFESTIQKNSSKTPAPGGGIHPLTRSAMNYISSLGDYGGILSDIITENSPIPSSYTETLAADDALSSPVAAQLGWLILVLLCKLDTKAELYRDVSLSYLFLANNLNFIVRTVTATNLKSLVGGEWVANHASKVKLYASNYEATAWNRVVGTLPERSSPEMESPEAAKEGLRKFNAAFEEAYRKQTSWRVEEGRLRDELKMSIAKKLLPTYRQFYEGCIEIVGGERDFSTKGFAVRFTPDDLGNYLSDLF 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 18202377 18204104 - MC09g1220 Mch9g1604 698486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1604 576 Gene3D Exocyst complex component Exo70 53 576 - -
Mch9g1604 576 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 576 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch9g1604 576 MobiDBLite consensus disorder prediction 1 31 - -
Mch9g1604 576 Pfam Exocyst complex component Exo70 N-terminal 39 122 - -
Mch9g1604 576 SUPERFAMILY Cullin repeat-like 41 576 IPR016159 -
Mch9g1604 576 Pfam Exo70 exocyst complex subunit C-terminal 215 574 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1815 Mch-Chr5:18484947 Mch9g1604 Mch-Chr9:18202377 4.65E-172 dispersed
Mch1g0755 Mch-Chr1:11350685 Mch9g1604 Mch-Chr9:18202377 2.54E-95 wgd
Mch5g1814 Mch-Chr5:18477719 Mch9g1604 Mch-Chr9:18202377 1.64E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1604 K07195 - csv:101221801 875.93