Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g1618 | ATGGTATCCGAAACATTGATGAAGATTGTGTCACCCTGCTGGAAACCGTCTGTTGAAGGTGAACATTCTAGCAGGGGTGGGGATGCAAGTGGTCGGGTTGATGGGCTGTTGTGGTACAAGGATTCTGGACGCCATATCAATGGCGAATTCTCGATGGCAGTTATTCAGGCAAATAATTTGTTGGAAGATCGCAGCCAACTCGAGTCGGGGCCATTGAGTTCATTTGAATTGGGTCCTCATGGAACTTTTGTTGGAATCTATGATGGCCATGGAGGTCCGGAAGCTGCAGAATTCATAAATGATCGTCTGTTCAATAATATGAAGACTTTTCATGGTGCAGAATTTATTCCAGAAAACCAGGGGGGAGTATCAGCTGAAATTATCAACAAAGCATTCTTGGAGACAGAGGAGGAATTCTTGTCTCTTGTAAAGAAACAATGGCTGATTAAGCCGCAAATTGCTTCGGTTGGTTCATGCTGTTTGGTAGGCATAATATGTTGTGGATTGCTGTATATTGCAAACGCTGGGGATTCTAGGGTGGTGTTGGGAAGATTTGAAAAAACGCTTAAAGAGGTTAAAGCTATCCAATTGTCATCTGAGCACAACGCAAGTATTGAATCTGTGAGGGAGGAGTTGCATTCATTGCATCCCAATGATCCGCAGATCGTGGTGTTAAAGCACAAGGTGTGGCGCGTAAAGGGTGTGATACAGGTCTCAAGATCCCTTGGTGATGCTTATCTGAAGAAAACAGAGTTCAACCGAGAGCCACTTTTGCCGAAGTTCAGGTTGCCTGAACCATTCCACAAGCCAATTCTTAAAGCCGAGCCTGCTATCGTAGTGCAGAAACTGTATCCAGAGGATCAGTTTCTTATATTTGCTTCAGATGGCCTTTGGGAATATATAAGCAATCAGGAAGCTGTCGACATCGTCAATAGTTGTCCACGTAATGGGATTGCAAGGAAACTTGTTAAAGCTGCTCTTCATGAAGCTGCAAAAAAGAGAGAAATGAGATACGCGGACTTGAAGAAGATCGACCGTGGGGTGAGAAGACATTTTCACGACGACATCACTGTTATAGTTTTGTTCCTCGATTCCCATCTGATTAGCCGCAGTCCGAGCTACGGACCGATGCTATCAATCAGAGGAGGTGCTGGTATCCTCACTAAATCATCATAG | 1176 | 44.47 | MVSETLMKIVSPCWKPSVEGEHSSRGGDASGRVDGLLWYKDSGRHINGEFSMAVIQANNLLEDRSQLESGPLSSFELGPHGTFVGIYDGHGGPEAAEFINDRLFNNMKTFHGAEFIPENQGGVSAEIINKAFLETEEEFLSLVKKQWLIKPQIASVGSCCLVGIICCGLLYIANAGDSRVVLGRFEKTLKEVKAIQLSSEHNASIESVREELHSLHPNDPQIVVLKHKVWRVKGVIQVSRSLGDAYLKKTEFNREPLLPKFRLPEPFHKPILKAEPAIVVQKLYPEDQFLIFASDGLWEYISNQEAVDIVNSCPRNGIARKLVKAALHEAAKKREMRYADLKKIDRGVRRHFHDDITVIVLFLDSHLISRSPSYGPMLSIRGGAGILTKSS | 391 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 18342636 | 18347871 | + | MC09g_new0389 | Mch9g1618 | 698500 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g1618 | 391 | FunFam | Phosphatase 2C family protein | 38 | 373 | - | - | |
Mch9g1618 | 391 | SMART | PP2C_4 | 41 | 361 | IPR001932 | - | |
Mch9g1618 | 391 | Pfam | Protein phosphatase 2C | 76 | 332 | IPR001932 | - | |
Mch9g1618 | 391 | CDD | PP2Cc | 50 | 363 | IPR001932 | - | |
Mch9g1618 | 391 | ProSitePatterns | PPM-type phosphatase domain signature. | 83 | 91 | IPR000222 | GO:0043169(InterPro) | |
Mch9g1618 | 391 | Gene3D | - | 39 | 371 | IPR036457 | - | |
Mch9g1618 | 391 | SUPERFAMILY | PP2C-like | 77 | 364 | IPR036457 | - | |
Mch9g1618 | 391 | ProSiteProfiles | PPM-type phosphatase domain profile. | 49 | 363 | IPR001932 | - | |
Mch9g1618 | 391 | PANTHER | PROTEIN PHOSPHATASE | 42 | 362 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0384 | Mch-Chr2:2843424 | Mch9g1618 | Mch-Chr9:18342636 | 1.73E-175 | dispersed | |
Mch7g1243 | Mch-Chr7:15956850 | Mch9g1618 | Mch-Chr9:18342636 | 4.39E-134 | dispersed | |
Mch9g1452 | Mch-Chr9:16876043 | Mch9g1618 | Mch-Chr9:18342636 | 1.59E-20 | dispersed | |
Mch9g1618 | Mch-Chr9:18342636 | Mch5g1306 | Mch-Chr5:13906182 | 3.51E-16 | dispersed | |
Mch5g1801 | Mch-Chr5:18398076 | Mch9g1618 | Mch-Chr9:18342636 | 3.42E-185 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch9g1618 | K01102 | - | csv:101220760 | 733.021 |