Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1622 ATGGGATGGTTTCTCTGTTCTGGAAGCTCCAATAAGAAGGCCAAGCAGCTTCACAAGGAGGACGATCCGATCCCATCCACTTCAGAAAAGCCGACATTTAATGGGAAGAACGAGGCCCTAAAAGATGGGGATTCTGATCAGATTTCAGCACAAACATTTACATTCACATTCCGAGAGTTGGCAGCTGCGACAAAGTATTTTAGAGCAGACTGTCTTTTAGGTGAAGGAGGTTTTGGTCGAGTATATAAAGGACGGTTGGATAGCATAAATCAGGTAGTTGCCATCAAGCAACTCGATCGAAATGGGCTACAAGGAAACAGGGAATTCCTTGTTGAAGTTCTAATGTTAAGCCTACTCCATCACCCAAATCTTGTTAATTTAATTGGCTATTGTGCAGAGGGTGATCAAAGACTTTTGGTTTATGAATACATGCCATTGGGATCTTTGGAAGACCATCTACATGATCTGCCACCTGATAAAAAACGGCTTGACTGGAATACAAGAATGAAAATAGCTGCAGGTGCTGCAAAGGGCTTAGAGTATTTGCACGACAAAGCTAACCCCCCAGTTATATATCGTGATCTAAAATGCTCAAACATCCTTCTGGACGAAGATTACCATCCCAAGCTATCCGATTTTGGCTTGGCTAAATTGGGCCCCGTGGGGGATAACACTCATGTGTCCACAAGAGTGATGGGAACTTATGGATACTGTGCTCCCGAATATGCAATGACTGGCCAGCTCACCTTAAAATCAGATGTTTTTAGCTTTGGAGTTGTTTTGCTAGAAATTATTACCGGCAGAAAAGCTATTGACAACTCAAGAGGCGCAGGGGAACACAATTTGGTGGCATGGGCACAACCCTTATTTAAAGATAGGAGGAAATTCTGGCAGATGGCTGATCCATTGCTCCAAGGACAATACCCAGTCAGGGGCTTATACCAAGCTCTTGCAGTCGCTGCAATGTGTGTTCAGGACCAGCCCAATATGCGACCCCTCATTGCTGATGTCGTTACGGCCCTAACATATCTTGCTTCCCAAAAATACGATCCCGAGACCCAGCCAGTTCAAAGCGCTCGCAGTAGCTCATCAACACCTAGATCTTCTAGACGAGAACTGTGA 1122 44.74 MGWFLCSGSSNKKAKQLHKEDDPIPSTSEKPTFNGKNEALKDGDSDQISAQTFTFTFRELAAATKYFRADCLLGEGGFGRVYKGRLDSINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCAEGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLDEDYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVFSFGVVLLEIITGRKAIDNSRGAGEHNLVAWAQPLFKDRRKFWQMADPLLQGQYPVRGLYQALAVAAMCVQDQPNMRPLIADVVTALTYLASQKYDPETQPVQSARSSSSTPRSSRREL 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 18385833 18391084 + MC09g_new0392 Mch9g1622 698504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1622 373 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524(InterPro)
Mch9g1622 373 MobiDBLite consensus disorder prediction 351 366 - -
Mch9g1622 373 ProSiteProfiles Protein kinase domain profile. 67 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1622 373 FunFam Serine/threonine-protein kinase PBS1 144 359 - -
Mch9g1622 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g1622 373 Gene3D Phosphorylase Kinase; domain 1 31 143 - -
Mch9g1622 373 Pfam Protein tyrosine and serine/threonine kinase 71 285 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g1622 373 MobiDBLite consensus disorder prediction 1 43 - -
Mch9g1622 373 PANTHER OS07G0668900 PROTEIN 28 365 - -
Mch9g1622 373 SUPERFAMILY Protein kinase-like (PK-like) 50 355 IPR011009 -
Mch9g1622 373 SMART serkin_6 67 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1622 373 FunFam Serine/threonine-protein kinase PBS1 38 143 - -
Mch9g1622 373 Gene3D Transferase(Phosphotransferase) domain 1 144 365 - -
Mch9g1622 373 CDD STKc_IRAK 73 342 - -
Mch9g1622 373 MobiDBLite consensus disorder prediction 351 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2045 Mch-Chr8:23342933 Mch9g1622 Mch-Chr9:18385833 6.50E-138 dispersed
Mch9g0252 Mch-Chr9:1887559 Mch9g1622 Mch-Chr9:18385833 2.00E-93 dispersed
Mch9g1622 Mch-Chr9:18385833 Mch9g2164 Mch-Chr9:22324118 2.16E-102 dispersed
Mch10g1250 Mch-Chr10:10104838 Mch9g1622 Mch-Chr9:18385833 8.91E-166 transposed
Mch3g0441 Mch-Chr3:7952832 Mch9g1622 Mch-Chr9:18385833 3.39E-181 transposed
Mch5g0682 Mch-Chr5:4584271 Mch9g1622 Mch-Chr9:18385833 7.21E-200 transposed
Mch7g0042 Mch-Chr7:375400 Mch9g1622 Mch-Chr9:18385833 6.24E-180 transposed
Mch9g0079 Mch-Chr9:654417 Mch9g1622 Mch-Chr9:18385833 5.23E-164 transposed
Mch5g1795 Mch-Chr5:18360202 Mch9g1622 Mch-Chr9:18385833 1.76E-202 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77704 PF00069 Pkinase 9.70E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1622 - - - 0.0