Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1638 ATGGATCACGTGGCCAAATCAAAATGTGAGAAATCTCCACCAACGCCGATCACCGTTCCACGCCCATTATCTTACTCCTCCCCATCTTCTTCCTCCGGCCGCTCCGCCTCTCCTCCGTCGTCGTCGCCACCGCCCACGGTGGTGCTCAGCCCCTGCGCCGCCTGCAAGATCCTCCGGCGCCGGTGCGTGGAGAAGTGTGTTTTGGCCCCATATTTCCCGCCGACGGAGCCCCTCAAATTCACCATTGCCCATAGAGTCTTTGGAGCCAGCAATATCATCAAGTTCTTGCAAGAACTTCCCGAGTGTCAAAGAACAGATGCAGTGAGCAGTATGGTGTACGAGGCAAATGCACGGTTGCGAGATCCGGTGTACGGGAGTGCAGGCGCGATTTGCCAGCTGCAGAAGCAAGTGAGCGAGCTGCAAGCGCAATTGGCCAAGGCTCGAGCAGAGGTAGCCAATATGCAGCAACAACAAGCCAACTTACTGGCCTTCATCTGCATGGAAATGAGGCAGTCATCGGAGCCCGTTTGGGCGCCGCAACACGTCGACACTGCCTGCTTTCTCGACGACGCCGCCCTTAGCTCGCCGTGGGAGCCGCTCTGGACGTGA 609 57.96 MDHVAKSKCEKSPPTPITVPRPLSYSSPSSSSGRSASPPSSSPPPTVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLAFICMEMRQSSEPVWAPQHVDTACFLDDAALSSPWEPLWT 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 18513217 18514988 + MC09g_new0395 Mch9g1638 698520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1638 202 MobiDBLite consensus disorder prediction 22 37 - -
Mch9g1638 202 ProSiteProfiles LOB domain profile. 50 151 IPR004883 -
Mch9g1638 202 MobiDBLite consensus disorder prediction 1 47 - -
Mch9g1638 202 Coils Coil 130 157 - -
Mch9g1638 202 Pfam Lateral organ boundaries (LOB) domain 51 148 IPR004883 -
Mch9g1638 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 50 160 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0514 Mch-Chr3:9169524 Mch9g1638 Mch-Chr9:18513217 2.01E-60 dispersed
Mch9g1433 Mch-Chr9:16724604 Mch9g1638 Mch-Chr9:18513217 9.07E-39 dispersed
Mch9g1638 Mch-Chr9:18513217 Mch2g0739 Mch-Chr2:5062145 1.45E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44074 PF03195 LOB 6.50E-40 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1638 - - - 0.0