Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1660 ATGTCAAATTCCGAAACTCCCAATAACGGCGTCTCCCAAAAGCCGCCGCCCTCTGCAACCAACGGAGCTCTCGCCGTCAAGAAGCCGCCGTCCAAGGACCGCCACAGCAAGGTTGACGGCCGTGGCCGCCGCATCCGTATGCCCATCATCTGCGCCGCCCGTGTTTTCCAGCTCACCCGCGAACTCGGCCTCAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCACGCCGAGCCCTCCATTATCGCCGCCACCGGCACTGGCACCACCCCGGCTAACTTCTCCTCCGTCGCCGTCTCCGTCAGGGGAAACAACGCCGGCTCCACTTCCCTCTCTTCCCCTTCTTCCACTACCTCCACGCTCTCCCTCTCCCGCCCCCAGCCTCTCTCCGGCCCCGCGCCGTTTATTCTCGGGAAGCGCGTCCGGTCCGACGATGACGCCGGCGGCGCCAAGGATGACGGGTTGGGCGTGGGTCCGACGGTTGGGTCCTTAGTGGGTCAGACGGGGCCGGGTGGGTACTGGGCGATTCCGGCAAGGCCGGACTACGGCCAGGTGTGGAGTTTCGCGGCGGCGGCGGCGGCTCCGTCGGAGATGGTGGTTCAACCGGGGGCGATTTCGCAGCAAGCGTCGTTGTTTTCTCAACAGCAGCAGCCGATTAGAGAGGCGTCGGCGGCGAGGGTGGGGAATTACCTTCCCGGACATCTGAATTTGCTGGCTTCTTTGTCCGGCGGAAGCTCCGGCCGGCGGGAAGATGACCCTCGCTAA 768 65.23 MSNSETPNNGVSQKPPPSATNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGLKSDGQTIEWLLRHAEPSIIAATGTGTTPANFSSVAVSVRGNNAGSTSLSSPSSTTSTLSLSRPQPLSGPAPFILGKRVRSDDDAGGAKDDGLGVGPTVGSLVGQTGPGGYWAIPARPDYGQVWSFAAAAAAPSEMVVQPGAISQQASLFSQQQQPIREASAARVGNYLPGHLNLLASLSGGSSGRREDDPR 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 18669790 18672139 + MC09g_new0409 Mch9g1660 698542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1660 255 MobiDBLite consensus disorder prediction 1 42 - -
Mch9g1660 255 MobiDBLite consensus disorder prediction 105 128 - -
Mch9g1660 255 ProSiteProfiles TCP domain profile. 31 85 IPR017887 -
Mch9g1660 255 MobiDBLite consensus disorder prediction 105 163 - -
Mch9g1660 255 MobiDBLite consensus disorder prediction 28 42 - -
Mch9g1660 255 Pfam TCP family transcription factor 31 111 IPR017887 -
Mch9g1660 255 MobiDBLite consensus disorder prediction 1 19 - -
Mch9g1660 255 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 152 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0042752(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g1660 Mch-Chr9:18669790 Mch9g2143 Mch-Chr9:22181244 2.28E-32 dispersed
Mch4g1635 Mch-Chr4:19547238 Mch9g1660 Mch-Chr9:18669790 8.79E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44076 PF03634 TCP 2.90E-30 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1660 K16221 - csv:101206050 346.665