Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g1662 | ATGTCTCGGAAATCTCAGGCGATGATTTCATTACAATCGATTAAGTCCATGCCAGTTAATTCCCGGTTTATGATTCCACAAACTTTGGAAGAGTCTGATGACCGGAATGTGAAAAACATGGAAGCTAGTTCGTTAGTTGATGGTGTGAATGGTGCTTCTGGAGATGATGCCGTCACTCGACTTCAATACAGTATTAACAATATTGATGAGCTGAATGAGGATTCACCATATAATTGCAATATTGAAACAGTTGAAGAAAGACCCACCTTGGATGATGGAGAAGATGGTTTTATGCCTTTACCTTCACCTTCAATCTCAGCTTCGCATAGTGAACGCAGGTGGGATGACACATCGTCCTACACGACAAGGAAGACAGTTCAATCTTGGTTTAAACTTCCAAATGGGAACTGGGATCTTGTAAAGATATTGTCAACTCCAGGGACGGAGTCAGTAGTTTCACTGTCTGATGGAAAGGTGTTGAAGGTGAAAGCTGAAAGTTTGATTCCTGCAAATCCAGATATCCTTGATGGTGTTGATGATCTTATGCAACTTAGCTATTTAAACGAGCCGTCAGTACTATATGATCTTGAGTACAGATATAATCAAGATATCATATATACAAAAGCAGGGCCTGTTCTGGTTGCTATCAACCCTTTTAAGAAAGTCGATTTGTACGGAAGTGATTACATTGAAGCATACAAGCGCAAAACAGTACAGAGCCCACACGTTTATGCCATTACAGATACAGCCATAAGGGAAATGATTCGAGATGAAGTAAACCAATCAATTATAATAAGTGGTGAAAGTGGAGCTGGAAAAACTGAAACAGCAAAGATAGCAATGCAATATTTGGCTGCCCTTGGAGGTGGAAGTGGAATAGAATACGAGATATTAAAGACCAATCCTATCTTAGAAGCTTTTGGAAATGCAAAAACATTGAGAAATGATAACTCAAGCCGCTTCGGAAAATTGATTGAAATCCATTTTAGTGAAACTGGAAAAATATCCGGTGCAACTATTCAAACTTTTTTGCTTGAAAAGTCGAGAGTTGTCCAATGCATGGAGGGAGAGAGGTCATACCACATCTTTTATCAGCTTTGTAGTGGGGCTCCACCTGCTCTTAAAGAGAGGCTAAACTTGAGAAGTGCTGAAGAGTACAAATATCTCAATCAGAGCAGTTGTTTTTCAATAACTAGAGTTAATGATGCTGAAGAGTTTCGTGTAGTCACGGAAGCATTAGATGTCGTCCATATCAGCAAAGAAGATCAGCACAGTGTTTTTGCAATGCTTGCTGCTGTGCTATGGCTGGGAAATGTTTCCTTTAGTGTGATTGAAAATGAGAATCATGTCGAGGTGGTGGACGATGAAGGTTTACAGACAGTTGCTAAACTGATTGAGTGTGAGGTTGAGGAGCTTAAGCTAGCTTTATCAACTCGAAAAATGAGAGTTGGTAATGACAGCATTGTTCAAAAGCTTACTTTATTACATTTTTTTATTTCTTTTCATTTGCAGGCAGTTGACACTAGAGATGCTTTGGCAAAGTCAATTTATGCTTGTTTGTTTGACTGGCTGGTGGAACAAATTAACAAATCTCTTGCTGTAGGCAAACGACGCACTGGCAGATCCATCAGCATTCTTGATATCTATGGTTTTGAATCATTTGATAGGAATAGTTTTGAGCAGTTCTGTATTAACTATGCAAACGAGAGACTACAGCAGCATTTTAATCGTCATTTATTTAAGCTAGAGCAGGAGGAATATATTCAAGATGGCATTGACTGGGCAAAAGTTGATTTTGACGACAACCAAGATTGTCTCAGTCTGTTTGAAAAGAAACCTTTGGGATTGTTGTCCCTGTTAGACGAGGAGTCTACTTTTCCAAACGGCACAGATCTGACCTTTGCTAACAAGCTTAAGCAGCATTTGGGTCCTAATTCTTCTTTTAGAGGAGAACGCGGGAAAGCCTTCACTGTCCATCATTATGCAGGAGAGGTCACATATGACACAACTAGTTTTCTGGAGAAAAACAGGGACTTGCTACATTTAGATTCTATTCAACTCCTATCCTCATGCTCATGCCATCTCCCTCGGATATTTGCATCCAACATGCTAAATCAATCAGAAAAGTCCATTGGTGGCACTTTACATAAATCTGGTGGTGCAGAATCCCAAAAACTAAGTGTTGCAAAAAAGTTCAAGGGTCAATTATTCCAATTGATGCTCCGTCTTGAAAATACAACACCTCATTTCATCCGTTGCATCAAGCCCAACAACCTTCAGTCTCCCAGCTTGTATGACCAAGGACTTGTATTACTACAGTTAAGATGTTGTGGGGTCCTAGAAGTGGTGCGAATATCACGAGCTGGTTTTCCTACCCGGATGTCACATCAGAAATTTGCTAGAAGGTATGGTTTCCTCCTTCAAGAAAGCATCATATCGCAGGATCCACTAAGTGTCTCAGTCGCAATTCTTCATCAGTTCGATATATTGCCTGAAATGTACCAAGTTGGCTATACAAAATTGTTCTTTCGAACTGGACAGATTGGAGTGCTCGAAGATACAAGAAACCGTACCCTCCATGGGATTTTATGCGTTCAAAGCTGCTATAGAGGGCACCTGGCTCGACGCCACCTCAAAAAGCTGAAGAGAGGGATTTCCATTCTTCAGTCATTTGCACGTGGGGAAAAAACCCGAAAAGAATATGCAATCTTGATAAGAAGGCATAGGGCTGCTATTTCTATTCAGAAGTATGTGAAAGCCAGAGTTGCTAAAAAACGTTTGGAGGAAGTTTGTGATGCATCACTTCTGATACAATCAGTTATTCGTGGCTGGTTGGTCAGAAGATGCTCAGGAGATATAGGATTAATGTCTGGTGGGCAGAAGGCAAATGGGTCAGATGAGGTGCTTGTCAAGTCATCTTTCGTCACAGAATTACAACGCCGTGTTCTGAGGGCCGAGGCAGCTTTGAGAGACAAAGAAGAAGAGAACGACATCCTCCATCAACGTCTCCAACAGTATGAGAACCGTTGGTCAGAGTACGAGCTAAAAATGAAGTCAATGGAAGAGGTATGGCAGAGACAAATGAGATCACTGCAATCTAGCCTCTCCATTGCAAAGAAAAGCTTAGCAGTCGATGATTCAGAGAGAAATTCTGATGCATCAGTCAATGCAAGCGACGACAGAGCATACAGTTGGGAAGTGGGCAGCAACAACACAGCTAACGAAAGCAATGGAGTAAGACCAATGAATGCAGGCCTCAGTGTCATTAGCCGGTTGGCTGAGGAATTCGAACAAAGAAGTCAAGTCTTCGGCGACGATGCCAAGTTCTTGGTAGAGGTAAAATCGGGTCAAGTCGAGGCGAGTCTCGACCCCGATAGGGAACTCAGAAGGTTGAAGCAGATGTTCGAAGCATGGAAGAAAGATTACGGGGGCAGGCTGCGCGAAACGAAAGTGATTTTGAACAAGCTTGGGAGTGAAGGTGCCATGGACAAGGTGAAAAAGAAATGGTGGGGAAGGAGGAACAGCACAAGATATAGT | 3537 | 41.73 | MSRKSQAMISLQSIKSMPVNSRFMIPQTLEESDDRNVKNMEASSLVDGVNGASGDDAVTRLQYSINNIDELNEDSPYNCNIETVEERPTLDDGEDGFMPLPSPSISASHSERRWDDTSSYTTRKTVQSWFKLPNGNWDLVKILSTPGTESVVSLSDGKVLKVKAESLIPANPDILDGVDDLMQLSYLNEPSVLYDLEYRYNQDIIYTKAGPVLVAINPFKKVDLYGSDYIEAYKRKTVQSPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGATIQTFLLEKSRVVQCMEGERSYHIFYQLCSGAPPALKERLNLRSAEEYKYLNQSSCFSITRVNDAEEFRVVTEALDVVHISKEDQHSVFAMLAAVLWLGNVSFSVIENENHVEVVDDEGLQTVAKLIECEVEELKLALSTRKMRVGNDSIVQKLTLLHFFISFHLQAVDTRDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLGPNSSFRGERGKAFTVHHYAGEVTYDTTSFLEKNRDLLHLDSIQLLSSCSCHLPRIFASNMLNQSEKSIGGTLHKSGGAESQKLSVAKKFKGQLFQLMLRLENTTPHFIRCIKPNNLQSPSLYDQGLVLLQLRCCGVLEVVRISRAGFPTRMSHQKFARRYGFLLQESIISQDPLSVSVAILHQFDILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILCVQSCYRGHLARRHLKKLKRGISILQSFARGEKTRKEYAILIRRHRAAISIQKYVKARVAKKRLEEVCDASLLIQSVIRGWLVRRCSGDIGLMSGGQKANGSDEVLVKSSFVTELQRRVLRAEAALRDKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQRQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDRAYSWEVGSNNTANESNGVRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGGRLRETKVILNKLGSEGAMDKVKKKWWGRRNSTRYS | 1179 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 18689394 | 18702311 | + | MC09g1252 | Mch9g1662 | 698544 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g1662 | 1179 | Gene3D | - | 358 | 414 | - | - | |
| Mch9g1662 | 1179 | Gene3D | Kinesin motor domain | 175 | 789 | IPR036961 | - | |
| Mch9g1662 | 1179 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 150 | 904 | IPR027417 | - | |
| Mch9g1662 | 1179 | Gene3D | - | 790 | 857 | - | - | |
| Mch9g1662 | 1179 | Pfam | IQ calmodulin-binding motif | 933 | 948 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g1662 | 1179 | Pfam | IQ calmodulin-binding motif | 862 | 879 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g1662 | 1179 | Pfam | IQ calmodulin-binding motif | 883 | 901 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g1662 | 1179 | PRINTS | Myosin heavy chain signature | 542 | 570 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g1662 | 1179 | PRINTS | Myosin heavy chain signature | 302 | 329 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g1662 | 1179 | PRINTS | Myosin heavy chain signature | 595 | 623 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g1662 | 1179 | PRINTS | Myosin heavy chain signature | 206 | 225 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g1662 | 1179 | PRINTS | Myosin heavy chain signature | 260 | 285 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g1662 | 1179 | Gene3D | - | 554 | 746 | - | - | |
| Mch9g1662 | 1179 | SMART | MYSc_2a | 170 | 857 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g1662 | 1179 | Coils | Coil | 975 | 1023 | - | - | |
| Mch9g1662 | 1179 | FunFam | Unconventional myosin-XIX | 554 | 746 | - | - | |
| Mch9g1662 | 1179 | Gene3D | - | 909 | 950 | - | - | |
| Mch9g1662 | 1179 | Gene3D | - | 861 | 908 | - | - | |
| Mch9g1662 | 1179 | CDD | MYSc_Myo8 | 190 | 844 | IPR036022 | - | |
| Mch9g1662 | 1179 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 123 | 172 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g1662 | 1179 | PANTHER | MYOSIN | 128 | 1169 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Mch9g1662 | 1179 | ProSiteProfiles | IQ motif profile. | 860 | 886 | - | - | |
| Mch9g1662 | 1179 | ProSiteProfiles | IQ motif profile. | 881 | 910 | - | - | |
| Mch9g1662 | 1179 | Pfam | Myosin head (motor domain) | 178 | 844 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g1662 | 1179 | ProSiteProfiles | Myosin motor domain profile. | 176 | 856 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g1662 | 1179 | SMART | iq_5 | 880 | 902 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g1662 | 1179 | SMART | iq_5 | 857 | 879 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g1662 | 1179 | SMART | iq_5 | 929 | 951 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g1662 | 1179 | SMART | iq_5 | 906 | 928 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g1662 | 1179 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 415 | 531 | - | - | |
| Mch9g1662 | 1179 | FunFam | Myosin heavy chain | 358 | 414 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g1115 | Mch-Chr11:7790626 | Mch9g1662 | Mch-Chr9:18689394 | 0 | dispersed | |
| Mch9g0990 | Mch-Chr9:8383091 | Mch9g1662 | Mch-Chr9:18689394 | 1.71E-174 | dispersed |
Pathway information