Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1703 ATGAGGAAGAAGCTCGATACCCGCTTTCCTGCTGCTCGAATTAAAAAGATAATGCAAGCAGATGAAGATGTTGGAAAGATAGCATTGGCAGTGCCCGTTTTAGTTTCTAAAGCATTGGAACTATTCCTGCAAGACCTCTGTGATCGTACATATGAGATTACTCTACAAAGGGGAGCAAAGACAATGAATTCATTGCACCTAAAGCACTGTGTACAAAGCTATAGTGTTTTTGATTTTCTGAGGGATATCGTTAGTCGGGTTCCGGATTATGGTCATGGTCATTCTGATGGTGCTGTTGATGATAGAAAGAGGAGGAAACCTCTTGGTGATGAGGGCAATGATTTTGATGAGTTGAAGAAGAGCAAGATGCATGACATGAGCCACAGCAGCGGCGGTAGAGGAAGAGGAAGAGGACGAGGACGGGGTCGTGGACGGCCTGCTCGGTCAGCCGAAAGAGACAACTTCCAAACTAACCCTGACGCCGACCCTTGCTCGTCTATAGAGAACAGGAACAAGAACCACCCCAACCCAGATGTGCACATGGATCATCACGTCGAGCCGAGCGAAACATCAAAAGAAGTTGGCGAAGCCAACCAACCTGTCCAAAGTTTTGATCTCAATGCCGACGTCATCGCCAACGGAGACTCCAAGACCGTTGTTGCAGCAGCAGCAGTATCAGACACGCCCGTCGAATCAGCCGGGCCTACTATCACCGAGTCTGAGACTAAAGCCGCGGACGAGTTCGTGGACAAAATGGCAATCGACCCTCTCCAATATGCACATCTGAGCAGCACAAGGGTGGAGGAAGAAGAGGAAGATTATGATGAAGAGGAGTGA 837 48.51 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHSDGAVDDRKRRKPLGDEGNDFDELKKSKMHDMSHSSGGRGRGRGRGRGRGRPARSAERDNFQTNPDADPCSSIENRNKNHPNPDVHMDHHVEPSETSKEVGEANQPVQSFDLNADVIANGDSKTVVAAAAVSDTPVESAGPTITESETKAADEFVDKMAIDPLQYAHLSSTRVEEEEEDYDEEE 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 18990512 18995689 + MC09g1292 Mch9g1703 698585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1703 278 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 174 IPR050568 GO:0001046(PANTHER)|GO:0005634(PANTHER)|GO:0016251(PANTHER)
Mch9g1703 278 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982(InterPro)
Mch9g1703 278 SUPERFAMILY Histone-fold 4 89 IPR009072 GO:0046982(InterPro)
Mch9g1703 278 MobiDBLite consensus disorder prediction 173 191 - -
Mch9g1703 278 MobiDBLite consensus disorder prediction 90 197 - -
Mch9g1703 278 FunFam dr1-associated corepressor homolog 1 86 - -
Mch9g1703 278 MobiDBLite consensus disorder prediction 90 132 - -
Mch9g1703 278 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Mch9g1703 278 MobiDBLite consensus disorder prediction 151 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0209 Mch-Chr2:1572279 Mch9g1703 Mch-Chr9:18990512 5.05E-67 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44080 PF00808 CBFD_NFYB_HMF 2.00E-19 CL0012 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1703 K21752 - csv:101209714 436.802