Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1707 ATGGGAAAGCTCAGCTTGAGCTGCTGCAATGGCTTCCTTGAAAATTCAAAACCTTACTTCGCCATGATATCCTTACAATTTGGATATGCTGGCATGAACATCATCTCCAAAGTCTCTCTAAGTCGAGGCATGAGCCATTACGTTCTCGTCGTATATCGTCATGCCTTCGCTACCGCTTCCATTGCCCCTTTCGTTCTCTTCTTCGAACGGAGGGGACAGCCAAAGATAACACTCAAAGTCTTCACTCAAATATTTGTGTTGGCTTTGCTTGGCCCGGTTATCGATCAAAATTTCTACTATGCCGGGTTGAAATATACTTCACCGACTTTCTCTTGCGCCATGAGCAACATGCTGCCCGCAATGACATTTGTGATGGCTGTGATCTTCAGGATGGAAAATTTGGACATGAAGAAATTGAGATGCCAAGCAAAAATTTTGGGAACTTTAGTGACAGTGGCAGGAGCAATGTTGATGACTTTGTACAAAGGGCCACTTGTTCAAATGGCTTGGTCTAAGCATTCTTCTAATTCTTCCACAAATTCTGATGAAAATAGTGCCAATAAAGATTGGTTTAAAGGCTCCATTTTCCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTCTTGCAGAATCAGGCATTGAAGACATACAAGAACCATCAGTTCACTCTCACCACACTGGTGTGTTTTCTTGGCACTCTTCAAGCCATTGCTGTGACATTAGTAGCTGAGCACAAAGCTTCTGTTTGGAGAATTGGTTGGGACATGAATCTCCTCGCCGCGGCATATGCTGGAATTGTGACATCAAGTATTTCATACTATGTACAAGGGCTGGTGATGAAGAAGAGGGGACCTGTCTTTGCAACTGCATTTAGCCCTTTGATGATGATCATTGTGGCTATCATGGGCTCTTTTATTCTTGCTGAAAAGATCTTCCTTGGAGGAATAATAGGATCCATCTTGATAGTATTTGGGCTATATTCAGTCCTTTGGGGGAAACACAGAGAGAATTTGGAGATCAAAAGTGCTTCTGCTGCTGCCGATGATGAAATACCAGAAGCAATAAAAGCTAATTCTAATCCTAATTTACAACCAAATAACAATAATAATGGAAATATGGGACCAAACAAGCCCTCTAATTCACTTTTTATTACCATTTCTGACCCTGAAAACCCCATCAAACCCAACCAAGTCCCAAGAGAATGA 1209 42.1 MGKLSLSCCNGFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERRGQPKITLKVFTQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMENLDMKKLRCQAKILGTLVTVAGAMLMTLYKGPLVQMAWSKHSSNSSTNSDENSANKDWFKGSIFLIIATLAWASLFVLQNQALKTYKNHQFTLTTLVCFLGTLQAIAVTLVAEHKASVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFATAFSPLMMIIVAIMGSFILAEKIFLGGIIGSILIVFGLYSVLWGKHRENLEIKSASAAADDEIPEAIKANSNPNLQPNNNNNGNMGPNKPSNSLFITISDPENPIKPNQVPRE 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19031676 19034887 - MC09g1296 Mch9g1707 698589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1707 402 PANTHER WAT1-RELATED PROTEIN 20 346 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch9g1707 402 MobiDBLite consensus disorder prediction 358 393 - -
Mch9g1707 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Mch9g1707 402 MobiDBLite consensus disorder prediction 357 402 - -
Mch9g1707 402 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020(InterPro)
Mch9g1707 402 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020(InterPro)
Mch9g1707 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1316 Mch-Chr5:14029411 Mch9g1707 Mch-Chr9:19031676 2.60E-159 dispersed
Mch6g2758 Mch-Chr6:29079888 Mch9g1707 Mch-Chr9:19031676 5.43E-79 dispersed
Mch7g0980 Mch-Chr7:14088255 Mch9g1707 Mch-Chr9:19031676 1.56E-79 dispersed
Mch8g1550 Mch-Chr8:12161394 Mch9g1707 Mch-Chr9:19031676 1.81E-46 dispersed
Mch8g2696 Mch-Chr8:30207880 Mch9g1707 Mch-Chr9:19031676 6.28E-40 dispersed
Mch8g2697 Mch-Chr8:30211045 Mch9g1707 Mch-Chr9:19031676 6.14E-64 dispersed
Mch8g2753 Mch-Chr8:30685804 Mch9g1707 Mch-Chr9:19031676 1.04E-78 dispersed
Mch9g1572 Mch-Chr9:17986224 Mch9g1707 Mch-Chr9:19031676 8.95E-96 dispersed
Mch1g0473 Mch-Chr1:9178636 Mch9g1707 Mch-Chr9:19031676 5.95E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1707 - - - 0.0