Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1723 TCAGTGATGTCCTTGGTTTCCATGTCTTGCAGTATTGCAGAGAACCTAAAAGTATATGCCATGACTGATGTCAGTCCAAGGACTGATATCTCTACAGATGTCGACACAGATGACAAAAACCAGAGGCTTGATATGGGTCAGCGTAATGCTGTTATGGCCTCTGATTCCAGTGATAGAACAAAAGATAAGTCTGATCAGAAGACTCTTCGGAGGCTTGCACAGAATCGTGAAGCTGCCAGAAAAAGCCGACTTAGGAAAAAGGCATATGTTCAACAGCTGGAGAGTAGTCGTTTAAAGTTGACCCAACTAGAGCAGGAGCTTCAGCGAGCACGGCAGCAGGGAATCTTCATATCAAGCTCAGGAGATCAAGCCCATTCAATGACTGGAAATGGGGCCATGACATTTGATGTGGAATATGCCCGTTGGTTGGAAGAACAAAACAAGCAGATCAATGAATTGAGAGCAGCAGTAAACTCACATGCAAGTGATACTGAACTTCGAATGATTGTTGATGGCGTCTTGGCTCATTATGATGAGGTTTTTCGGCTCAAAGGTGTCGCTGCAAAGGCTGATGTTTTCCATTTATTGTCTGGCATGTGGAAAACACCTGCTGAAAGATGTTTTTTGTGGCTTGGTGGTTTCCGGTCATCGGAGCTCTTAAAGCTTCTTGTCAGTCAGTTAGAGCCCCTCACAGAGCAGCAGTTGATGGGCATATCCAACTTGCAGCAGTCGTCACAACAGACCGAAGATGCATTGTCGCAGGGCATGGAGGCATTGCAACAATCACTGGCTGAGACATTGTCCAGTGGATCTCTTGGCTCCTCAAATGCGTCTGGCAATGTGGCAAACTACATGGGTCAGATGGCCACAGCAATGGGTAAACTCGGGACCCTCGAGGGATTTATTCGCCAGGCTGACAATCTACGGCAACAAACACTACAACAAATGCATCGGATATTAACAACTCGCCAGTCAGCTCGTGCACTTCTTGCAATTCATGATTACTTCTCCAGACTACGAGCCCTTAGTTCCCTGTGGCTTGCTCGGCCGAAGGAGTGA 1059 46.84 SVMSLVSMSCSIAENLKVYAMTDVSPRTDISTDVDTDDKNQRLDMGQRNAVMASDSSDRTKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMTGNGAMTFDVEYARWLEEQNKQINELRAAVNSHASDTELRMIVDGVLAHYDEVFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMGISNLQQSSQQTEDALSQGMEALQQSLAETLSSGSLGSSNASGNVANYMGQMATAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPKE 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19194764 19198941 - MC09g1311 Mch9g1723 698605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1723 352 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 70 85 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1723 352 Coils Coil 143 163 - -
Mch9g1723 352 CDD bZIP_HBP1b-like 67 119 - -
Mch9g1723 352 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 65 109 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1723 352 Gene3D - 66 118 - -
Mch9g1723 352 Coils Coil 86 113 - -
Mch9g1723 352 MobiDBLite consensus disorder prediction 30 44 - -
Mch9g1723 352 ProSiteProfiles DOG1 domain profile. 132 349 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Mch9g1723 352 SMART brlzneu 63 126 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1723 352 Pfam bZIP transcription factor 67 107 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1723 352 MobiDBLite consensus disorder prediction 28 68 - -
Mch9g1723 352 PANTHER TRANSCRIPTION FACTOR TGA9 38 352 - -
Mch9g1723 352 FunFam BZIP family transcription factor 66 115 - -
Mch9g1723 352 SUPERFAMILY Leucine zipper domain 67 110 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1723 352 Pfam Seed dormancy control 149 225 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1294 Mch-Chr5:13803086 Mch9g1723 Mch-Chr9:19194764 2.08E-163 dispersed
Mch8g0171 Mch-Chr8:1092042 Mch9g1723 Mch-Chr9:19194764 2.01E-180 dispersed
Mch9g1723 Mch-Chr9:19194764 Mch3g0661 Mch-Chr3:11100891 1.19E-102 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44082 PF14144 DOG1 2.40E-33 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1723 K14431 - csv:101216885 582.408