Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1765 ATGGGGAAGAAAGGGTGGTTTTCTACAGCGAGGAGGGTTCTCAGTCTCAGTTCTGAGAAGAAAGATAAGAAACAAGACAAATCCAAGAAAAAATGGTTTCAAGAGGAAGAGCAAGAGAGTACGGATGTGATATCCTTTTTGGAACAATCCCCATCGGATGTTCCTGTACAACCTCCTCTTATAGAAGATGATGTCAAACAAACCCAACCAAAGAATGAACGAAGCGTGTTCGAACGCTCCGAGGATGTGGAGCCTGCTGTCAGTGCAGCTCAGCCGGATGGGGAGGTTGAACGTTCACCTAGTATTATCTCCTGTCACCCAGAAATGTCGGAGGAAGATGCAGCTATTATGATTCAAACTGCTTTTCGTGGATATACGGCAAGGAGAGCATTGAGGGCTCTGAAAGCGTTGATGAGACTGAAGTCATTGGTACAAGGGCAGTCTGTCAAACGGCAAGTGGCTTCTTCTTTAAAATCCATGCAGACCCTTTCCCATGTACAGTCAGAGATTCGTGCTAGGAGAATTAGAATGTCAGAAGAAAATCAGGCTCTTCAGCGGCAACTTCGTCTTAGACGCGAAAAAGAGCTTGAGAAGTTAAAACCTACAGCTATGGACGAGGACTGGAACCATAGCACCCAATCTAAAGCACAAGTTGAAGCTAAACTATTGAACAAGCAAGAAGCTGCACTAAGAAGAGAAAGGGCTCTGGCTTATTCTTACTCTCATCAGCAAACATGGAAAAATTCTTCTAAAACTGCAACCGACCCAAACAATCCCCACTGGGGTTGGAGTTGGTTGGAGAGGTGGATGGCAGCTCGTCCGTGGGAAACTCGAAGCATCACTGATCACCAAGATAACGTCTCTGTCACGAGTATGGCAACTCGTGCATCTGTGGTCGACATAATCGAAGTTTATGGTCGTCGTGATCAGAACCTTGCAGCCCAGTCTTCCCCAAGGACTCCTACTAGCCATAAGTCAAGCCAACTGCTTAGGCAACGGCCACCTTCAACTCTGAAGGCATCATCTTCATCTGGCAGACAGAAAACAAATTCGGCCAACCTGGGATTAGGTAGCTGGGGCGGTGATGATGACTTGAGAAGCATAGCGAGTGACAAGGCAAAGCTCTCCCGGAGGCATACTATTGCAGGGTCATCGTTCAGGGACGACAAGATCCTTGTCAGTTTACCTTCAGTTACAAGTTACACGAATATATCGAAGGCTGTGAAGACTCGGTCCCGGTTGGCAAGTTCATCTGGAGCAGAGAAGAAAGGCAGTACATTTGAAAAAGGGTCTGCAAGTGCAAATTCTGTAAAGAAGCGGCTCTCATTTACCACTTCCCCCGCTAAACCAAGAAGGCTATCAAGTCCTCCAATTGTGAATGCTTAG 1386 46.68 MGKKGWFSTARRVLSLSSEKKDKKQDKSKKKWFQEEEQESTDVISFLEQSPSDVPVQPPLIEDDVKQTQPKNERSVFERSEDVEPAVSAAQPDGEVERSPSIISCHPEMSEEDAAIMIQTAFRGYTARRALRALKALMRLKSLVQGQSVKRQVASSLKSMQTLSHVQSEIRARRIRMSEENQALQRQLRLRREKELEKLKPTAMDEDWNHSTQSKAQVEAKLLNKQEAALRRERALAYSYSHQQTWKNSSKTATDPNNPHWGWSWLERWMAARPWETRSITDHQDNVSVTSMATRASVVDIIEVYGRRDQNLAAQSSPRTPTSHKSSQLLRQRPPSTLKASSSSGRQKTNSANLGLGSWGGDDDLRSIASDKAKLSRRHTIAGSSFRDDKILVSLPSVTSYTNISKAVKTRSRLASSSGAEKKGSTFEKGSASANSVKKRLSFTTSPAKPRRLSSPPIVNA 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19578536 19583210 - MC09g1350 Mch9g1765 698647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1765 461 MobiDBLite consensus disorder prediction 1 100 - -
Mch9g1765 461 SMART iq_5 110 132 IPR000048 GO:0005515(InterPro)
Mch9g1765 461 MobiDBLite consensus disorder prediction 411 461 - -
Mch9g1765 461 MobiDBLite consensus disorder prediction 310 356 - -
Mch9g1765 461 MobiDBLite consensus disorder prediction 15 38 - -
Mch9g1765 461 MobiDBLite consensus disorder prediction 66 81 - -
Mch9g1765 461 MobiDBLite consensus disorder prediction 411 451 - -
Mch9g1765 461 ProSiteProfiles IQ motif profile. 111 139 - -
Mch9g1765 461 PANTHER IQ-DOMAIN 5-RELATED 3 429 - -
Mch9g1765 461 MobiDBLite consensus disorder prediction 310 357 - -
Mch9g1765 461 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0291 Mch-Chr4:1872019 Mch9g1765 Mch-Chr9:19578536 3.42E-13 dispersed
Mch7g0083 Mch-Chr7:896691 Mch9g1765 Mch-Chr9:19578536 1.46E-18 dispersed
Mch9g0244 Mch-Chr9:1837269 Mch9g1765 Mch-Chr9:19578536 2.08E-12 dispersed
Mch1g0786 Mch-Chr1:11528501 Mch9g1765 Mch-Chr9:19578536 2.33E-68 wgd
Mch4g2077 Mch-Chr4:22941834 Mch9g1765 Mch-Chr9:19578536 3.73E-109 wgd
Mch5g1773 Mch-Chr5:18235496 Mch9g1765 Mch-Chr9:19578536 2.34E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1765 - - - 0.0