Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g1831 | ATGAACTGTCTTCAAAACCTTTCACTATCATCTACTTTGCCTCTGCGAAGCTTCAAATGCCGGAAGATAAAGCCTGAATTCCAGCTCTGCAAACTGGTAATGAGGAATTTTACCGATCTACATCGCCGTTCTCTTGTGAAGGCAGTACCTGGCTCTACATCAAATGCCGAAATGAGTGGCGCTGAGGTGAATGATGCTGAGGAAAAGGAGGAAAAATCTGAGATATATAGTCATAACATGACAGAAGCCATGGGTGCTGTATTGACATATAGACATGAGCTGGGAATGAACTACAACTTCATTCGTCCAGATTTAATTGTAGGATCATGCCTACAGACTCCAGAAGATGTTGACAAGCTTCGCAGCATTGGAGTAAGAACAATTTTCTGCCTGCAGCAAGATCCAGATTTGGAATATTTTGGAGTTGACATTGGTGCCATAATAGCATATTCAAAGACGTATGATGATATTGAACATTTGCGTGCTCAAATAAGGGATTTTGATGCACACGATCTACGGCTAAGATTACCAGCTGTTGTAAGCAAATTACATAAAGCCATTAACCGAAATGGTGGAGTGACTTATATACATTGCACTGCTGGACTTGGAAGAGCTCCTGCTGTTGCGATGGCATATATGTTCTGGGTTCAAGGCTACGGACTCCATGAGGCTATAGAACTACTGCTGAGCAAACGCTCATGCTTCCCCAAAATAGATGCTATTAAAAGTGCAACTGCTGATATTCTTTCAGGATTTCGAAAGAAGCTTGTCACTTTATCGTGGAAAAATGACCAATGCTCAACTGTAGAAGTATCTGGACTTGACATTGGATGGGGCCAGAGGATTCCATTAAAATTCAACGAGGAACGAGGTGCATGGATTCTCAACAGAGAACTGCCGGAAGGGCGATATGAATACAAGTACATCATTGATGGTGTATGGACATGCAATGAAGCTGAGCTCGTCACTCCTCCCAACCAAGATGGCCACGTCAACAATTTCATTCAAGTTGTTGATGATGATCCAAGCAGTGAAAGAGCAATTCTTCGGGGGAGGTTAAATGGAGATGAACCAGAGCTCACGGCCGAAGAAAGAAGCAAAATAAGACAATTTCTTGAAGCTTATCCAGATGAAAATTGA | 1140 | 42.28 | MNCLQNLSLSSTLPLRSFKCRKIKPEFQLCKLVMRNFTDLHRRSLVKAVPGSTSNAEMSGAEVNDAEEKEEKSEIYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGVRTIFCLQQDPDLEYFGVDIGAIIAYSKTYDDIEHLRAQIRDFDAHDLRLRLPAVVSKLHKAINRNGGVTYIHCTAGLGRAPAVAMAYMFWVQGYGLHEAIELLLSKRSCFPKIDAIKSATADILSGFRKKLVTLSWKNDQCSTVEVSGLDIGWGQRIPLKFNEERGAWILNRELPEGRYEYKYIIDGVWTCNEAELVTPPNQDGHVNNFIQVVDDDPSSERAILRGRLNGDEPELTAEERSKIRQFLEAYPDEN | 379 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 20091929 | 20100740 | - | MC09g1402 | Mch9g1831 | 698713 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g1831 | 379 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 174 | 232 | IPR000387 | GO:0016311(InterPro) | |
Mch9g1831 | 379 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 97 | 254 | IPR020422 | GO:0006470(InterPro) | |
Mch9g1831 | 379 | MobiDBLite | consensus disorder prediction | 51 | 72 | - | - | |
Mch9g1831 | 379 | Gene3D | Protein tyrosine phosphatase superfamily | 90 | 371 | IPR029021 | - | |
Mch9g1831 | 379 | CDD | DSP_laforin-like | 96 | 243 | IPR045204 | GO:0019203(InterPro) | |
Mch9g1831 | 379 | Pfam | Glycogen recognition site of AMP-activated protein kinase | 257 | 341 | IPR032640 | - | |
Mch9g1831 | 379 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 3 | 378 | IPR052832 | GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER) | |
Mch9g1831 | 379 | Gene3D | Immunoglobulins | 252 | 343 | IPR013783 | - | |
Mch9g1831 | 379 | FunFam | Phosphoglucan phosphatase DSP4, chloroplastic | 90 | 272 | - | - | |
Mch9g1831 | 379 | SUPERFAMILY | E set domains | 255 | 338 | IPR014756 | - | |
Mch9g1831 | 379 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 94 | 239 | IPR029021 | - | |
Mch9g1831 | 379 | FunFam | Phosphoglucan phosphatase DSP4, chloroplastic | 252 | 342 | - | - | |
Mch9g1831 | 379 | CDD | E_set_AMPKbeta_like_N | 257 | 337 | - | - | |
Mch9g1831 | 379 | Pfam | Dual specificity phosphatase, catalytic domain | 152 | 235 | IPR000340 | GO:0016311(InterPro) | |
Mch9g1831 | 379 | SMART | dsp_5 | 97 | 247 | IPR020422 | GO:0006470(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch9g1401 | Mch-Chr9:16441404 | Mch9g1831 | Mch-Chr9:20091929 | 1.13E-46 | dispersed |
Pathway information
