Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1831 ATGAACTGTCTTCAAAACCTTTCACTATCATCTACTTTGCCTCTGCGAAGCTTCAAATGCCGGAAGATAAAGCCTGAATTCCAGCTCTGCAAACTGGTAATGAGGAATTTTACCGATCTACATCGCCGTTCTCTTGTGAAGGCAGTACCTGGCTCTACATCAAATGCCGAAATGAGTGGCGCTGAGGTGAATGATGCTGAGGAAAAGGAGGAAAAATCTGAGATATATAGTCATAACATGACAGAAGCCATGGGTGCTGTATTGACATATAGACATGAGCTGGGAATGAACTACAACTTCATTCGTCCAGATTTAATTGTAGGATCATGCCTACAGACTCCAGAAGATGTTGACAAGCTTCGCAGCATTGGAGTAAGAACAATTTTCTGCCTGCAGCAAGATCCAGATTTGGAATATTTTGGAGTTGACATTGGTGCCATAATAGCATATTCAAAGACGTATGATGATATTGAACATTTGCGTGCTCAAATAAGGGATTTTGATGCACACGATCTACGGCTAAGATTACCAGCTGTTGTAAGCAAATTACATAAAGCCATTAACCGAAATGGTGGAGTGACTTATATACATTGCACTGCTGGACTTGGAAGAGCTCCTGCTGTTGCGATGGCATATATGTTCTGGGTTCAAGGCTACGGACTCCATGAGGCTATAGAACTACTGCTGAGCAAACGCTCATGCTTCCCCAAAATAGATGCTATTAAAAGTGCAACTGCTGATATTCTTTCAGGATTTCGAAAGAAGCTTGTCACTTTATCGTGGAAAAATGACCAATGCTCAACTGTAGAAGTATCTGGACTTGACATTGGATGGGGCCAGAGGATTCCATTAAAATTCAACGAGGAACGAGGTGCATGGATTCTCAACAGAGAACTGCCGGAAGGGCGATATGAATACAAGTACATCATTGATGGTGTATGGACATGCAATGAAGCTGAGCTCGTCACTCCTCCCAACCAAGATGGCCACGTCAACAATTTCATTCAAGTTGTTGATGATGATCCAAGCAGTGAAAGAGCAATTCTTCGGGGGAGGTTAAATGGAGATGAACCAGAGCTCACGGCCGAAGAAAGAAGCAAAATAAGACAATTTCTTGAAGCTTATCCAGATGAAAATTGA 1140 42.28 MNCLQNLSLSSTLPLRSFKCRKIKPEFQLCKLVMRNFTDLHRRSLVKAVPGSTSNAEMSGAEVNDAEEKEEKSEIYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGVRTIFCLQQDPDLEYFGVDIGAIIAYSKTYDDIEHLRAQIRDFDAHDLRLRLPAVVSKLHKAINRNGGVTYIHCTAGLGRAPAVAMAYMFWVQGYGLHEAIELLLSKRSCFPKIDAIKSATADILSGFRKKLVTLSWKNDQCSTVEVSGLDIGWGQRIPLKFNEERGAWILNRELPEGRYEYKYIIDGVWTCNEAELVTPPNQDGHVNNFIQVVDDDPSSERAILRGRLNGDEPELTAEERSKIRQFLEAYPDEN 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20091929 20100740 - MC09g1402 Mch9g1831 698713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1831 379 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 174 232 IPR000387 GO:0016311(InterPro)
Mch9g1831 379 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 254 IPR020422 GO:0006470(InterPro)
Mch9g1831 379 MobiDBLite consensus disorder prediction 51 72 - -
Mch9g1831 379 Gene3D Protein tyrosine phosphatase superfamily 90 371 IPR029021 -
Mch9g1831 379 CDD DSP_laforin-like 96 243 IPR045204 GO:0019203(InterPro)
Mch9g1831 379 Pfam Glycogen recognition site of AMP-activated protein kinase 257 341 IPR032640 -
Mch9g1831 379 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 3 378 IPR052832 GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER)
Mch9g1831 379 Gene3D Immunoglobulins 252 343 IPR013783 -
Mch9g1831 379 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 90 272 - -
Mch9g1831 379 SUPERFAMILY E set domains 255 338 IPR014756 -
Mch9g1831 379 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 94 239 IPR029021 -
Mch9g1831 379 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 252 342 - -
Mch9g1831 379 CDD E_set_AMPKbeta_like_N 257 337 - -
Mch9g1831 379 Pfam Dual specificity phosphatase, catalytic domain 152 235 IPR000340 GO:0016311(InterPro)
Mch9g1831 379 SMART dsp_5 97 247 IPR020422 GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g1401 Mch-Chr9:16441404 Mch9g1831 Mch-Chr9:20091929 1.13E-46 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1831 - - - 0.0