Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g1841 | TCTCTTAACTCAATGGCTTATTTCTCCCTCATCGCTTTCTTCCTCTCCGCCTTGATCTTCTTCCTCATCAAAAACCCAAAAAAACTCGGCCCGAAACTCCCACCCGGACCGCCCGGTTGGCCCCTCGTCGGCAACCTCTTTCAAGTCGCTTGTTCTAAGAAACCCTTCTTCCAATTCATCGAAGATCAACGCCGAATTTACGGTCCAATTTTCACCCTCAAAATGGGCACCACGACGATGATTGTTCTGAGCGATTCGGATCTGATTCACGAAGCTCTGATTAAGAAGGGCCCAATTTTTGCCAATCGGCCCAGAGAAAATCCCACGAGGTCTATTTTTAGCAGCAACAAATTTTCCGTCAATGCGGCGGCTTACGGCCCGGTGTGGCGGTCCCTCCGCCGCAACATGGTGGAGAACATGCTCAGCTCCGGTAAGTTGAAGGAGTTTCGCGGCGTGAGACGAAATGCAATGGAGAAATTCGTGGAACGCATAAGAGCCGAGGCAGAGGCCCAAGACGGCGTCGTTTGGGTGCTGAAAAACGCGCGTTTTGCGGTGTTTTGGATTCTGTTAACGATGTGTTTCGGAATCGAGATGGAGGAAGAGACGGTGGAGAAAATGGACGAGATTCTCAAAACTGTTTTACTCACGCTCGAGCCGAGAATCGACGATTATCTCCCGATTCTTGCCCCGTTTTATTCCAACGCGAGGAACCGGGCCGTGGAAGTTAGGAAACGACAAGTCGAATTCGTGGTTCGGCTGATCGAGCGGCGGCGGAGGGCGCTGGCGAATCCGGCATCGGACGGCGCCGCGACGTCGTTTTCGTACCTGGACACGCTGTTCGATCTGAAATTCGACGGCGGGGGGAGGTGCTCGCCGCCGACGGACGAGGAATTAGTGACTCTGTGCTCGGAGTTTCTGAACGGCGGAACGGACACGACGGCGACGGCGATCGAGTGGGGAATCGCGCAATTGATCGCGAATCCGGAAGTTCAGGGGAAGATTGTAGAAGAAATTAAAAGGACGGTGGGTGAGAGAAAAGTGGAAGAAGCTGACGTGGAGAAAATGCCGTATTTAAAGGCGGTGGTGAAAGAGGTGCTGCGGAAACATCCTCCCACCTTCTTCGCTTTATCGCACTCCGTGACGGAGCCGGCCATACTCGCAGGTTACGATATCCCGAAAGACGCGAACGTGGAGATCTTCTTACCGGCCATCGGAGCGGATCCGAAGCTGTGGAAGAATCCAGAGAATTTCGAACCGGAGAGATTTTTCTCCGGCGAGGAAGAAGCCGACATAACCGGCGTCACCGGAGTGAGAATGATGCCGTTCGGCGTAGGGCGGCGGATTTGCCCAGGAATGGGAATGGCCACCGTCCACGTCCATCTAATGCTTGCCAGAATGGTGCAGGAATTTGAATGGACGCCGTATCCGCCGTCAAGCTCCGTTGACTTCTCCTGGAACATGGAGTTCACCGTCGTCATGAAGAATCCTCTGAGAGCTATCATCAAATCTAGGGTTTAG | 1518 | 53.43 | SLNSMAYFSLIAFFLSALIFFLIKNPKKLGPKLPPGPPGWPLVGNLFQVACSKKPFFQFIEDQRRIYGPIFTLKMGTTTMIVLSDSDLIHEALIKKGPIFANRPRENPTRSIFSSNKFSVNAAAYGPVWRSLRRNMVENMLSSGKLKEFRGVRRNAMEKFVERIRAEAEAQDGVVWVLKNARFAVFWILLTMCFGIEMEEETVEKMDEILKTVLLTLEPRIDDYLPILAPFYSNARNRAVEVRKRQVEFVVRLIERRRRALANPASDGAATSFSYLDTLFDLKFDGGGRCSPPTDEELVTLCSEFLNGGTDTTATAIEWGIAQLIANPEVQGKIVEEIKRTVGERKVEEADVEKMPYLKAVVKEVLRKHPPTFFALSHSVTEPAILAGYDIPKDANVEIFLPAIGADPKLWKNPENFEPERFFSGEEEADITGVTGVRMMPFGVGRRICPGMGMATVHVHLMLARMVQEFEWTPYPPSSSVDFSWNMEFTVVMKNPLRAIIKSRV | 505 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 20224563 | 20227001 | + | MC09g1411 | Mch9g1841 | 698723 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g1841 | 505 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | P450 superfamily signature | 449 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | P450 superfamily signature | 440 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 15 | 503 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Mch9g1841 | 505 | FunFam | Cytochrome P450 family protein | 27 | 505 | - | - | |
| Mch9g1841 | 505 | Gene3D | Cytochrome P450 | 26 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | CDD | CYP77_89 | 66 | 498 | - | - | |
| Mch9g1841 | 505 | Pfam | Cytochrome P450 | 34 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 442 | 451 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch9g1841 | 505 | SUPERFAMILY | Cytochrome P450 | 34 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | E-class P450 group I signature | 449 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | E-class P450 group I signature | 439 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g1841 | 505 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch1g1769 | Mch-Chr1:18077314 | Mch9g1841 | Mch-Chr9:20224563 | 4.27E-149 | dispersed | |
| Mch2g1239 | Mch-Chr2:8589764 | Mch9g1841 | Mch-Chr9:20224563 | 1.60E-83 | dispersed | |
| Mch9g1841 | Mch-Chr9:20224563 | Mch11g0338 | Mch-Chr11:2084976 | 2.49E-58 | dispersed | |
| Mch4g1994 | Mch-Chr4:22319813 | Mch9g1841 | Mch-Chr9:20224563 | 3.68E-256 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch9g1841 | K21995 | - | csv:101217068 | 768.844 |