Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1849 ATGGAGCAGTATGAGAAAGTTGAGAAGATTGGAGAAGGAACTTATGGTGTGGTTTACAAGGCACGCGATCGTGTCACAAATGAGACTATTGCTTTGAAGAAGATCCGCTTGGAGCAGGAAGATGAGGGAGTGCCAAGCACAGCCATTCGTGAAATTTCACTGTTGAAGGAAATGCAGCATGGCAACATTGTGAGGTTACAAGATGTAGTGCACAGCGAGAAGCGCCTGTATCTTGTTTTTGAGTATCTGGATTTGGATTTGAAGAAGCACATGGATTCCTCTCCTGAATTTTCAAAGGATCCACGTCAAATAAAAATGTTTCTTTACCAAATTCTTCGTGGCATTGCATATTGTCATTCTCATAGAGTTCTCCATCGAGATCTAAAACCACAAAATTTACTGATAGATCGTCGTACCAATGCCCTGAAGCTTGCTGACTTCGGACTGGCAAGAGCATTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTAACACTTTGGTACAGAGCACCAGAAATATTACTTGGTTCCCGACATTATTCCACCCCTGTGGATGTGTGGTCAGTGGGTTGTATATTTGCTGAGATGGTTAACCAGCGGCCATTATTCCCTGGGGACTCTGAGATTGATGAATTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATACGTGGCCTGGTGTTACATCTTTGCCTGATTTTAAGTCTGCTTTCCCCAAGTGGCCTCCTAAGGATCTGGCTTCTGTAGTTCCAAATCTTGAATCCGCTGGCATTGATCTTCTCTCTAAAATGCTGTGCTTGGATCCCACCAAAAGAGTCACGGCCAGGAGTGCTCTTGAGCACGAATACTTCAAAGATGTTGGGTTTGTTCCCTAA 885 43.5 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDPRQIKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPPKDLASVVPNLESAGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20279464 20284905 + MC09g1418 Mch9g1849 698731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1849 294 Pfam Protein kinase domain 4 287 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1849 294 ProSiteProfiles Protein kinase domain profile. 4 287 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1849 294 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524(InterPro)
Mch9g1849 294 FunFam Cell division control protein 2 homolog 86 292 - -
Mch9g1849 294 Gene3D Transferase(Phosphotransferase) domain 1 86 292 - -
Mch9g1849 294 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Mch9g1849 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g1849 294 PANTHER CELL DIVISION PROTEIN KINASE 3 287 IPR050108 GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)|GO:0051445(PANTHER)
Mch9g1849 294 FunFam Cell division control protein 2 1 84 - -
Mch9g1849 294 CDD STKc_CDK1_CdkB_like 4 287 - -
Mch9g1849 294 SMART serkin_6 4 287 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1849 294 SUPERFAMILY Protein kinase-like (PK-like) 1 290 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1718 Mch-Chr10:17181485 Mch9g1849 Mch-Chr9:20279464 3.04E-67 dispersed
Mch1g0587 Mch-Chr1:10075525 Mch9g1849 Mch-Chr9:20279464 2.50E-114 dispersed
Mch1g1278 Mch-Chr1:14971364 Mch9g1849 Mch-Chr9:20279464 1.56E-35 dispersed
Mch6g0407 Mch-Chr6:2693329 Mch9g1849 Mch-Chr9:20279464 1.30E-87 dispersed
Mch8g0641 Mch-Chr8:4612842 Mch9g1849 Mch-Chr9:20279464 2.38E-40 dispersed
Mch9g1264 Mch-Chr9:14505988 Mch9g1849 Mch-Chr9:20279464 8.09E-54 dispersed
Mch9g1849 Mch-Chr9:20279464 Mch6g2712 Mch-Chr6:28749758 1.06E-29 dispersed
Mch9g1849 Mch-Chr9:20279464 Mch8g0091 Mch-Chr8:506886 1.51E-90 transposed
Mch9g1849 Mch-Chr9:20279464 Mch9g2347 Mch-Chr9:23460276 1.02E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77709 PF00069 Pkinase 3.30E-81 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1849 K02206 - csv:116405161 590.112