Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1872 ATGGGAGTGCCTGCTGCTTCGGGCGATGATTTTCTGAGGGAAAGAGCGGCGAAGATGAGAGAATCGATGCTGAAGAGCCAAACCATTACCGATAACGTCGTTTCGATCCTTGGTTCGTTTGACCATCGCCTTTCTGCTCTTGAGACCGCCATGCGTCCTACTCAGATCAGAACCCATTCTATTCGCAAAGCTCATGAGAACATTGACAAGACTTTGAAGGCCGCGGAGGTTATTTTAGCTCAGTTTGATCTCTCTCGTCAGGCAGAAACGAAAATACTTAAAGGGCCTCATGAGGATTTGGAGAGTTATCTTGGGGCAATTGATCAATTAAGAAACATTATTAAATTCTTTAGCAGTCATAAAGGTTTCAAGAGTAGTGAGGTAGTACTTAACCAGGCAAATAATCTGCTTGCAAAAGCCATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCGTCTTACAGCAAACCTGTGGAGCCTGAGCGCCTTTTTGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGAATCTCCTGGTCATCAAGATGATTCAGGTGGGAAGAATCCCTCCTCAAATCATCATTCTGCACATCATGATAATAACTTGGAGAATGCTGTCTACACACCTCCCACTCTCATACCACCACGTGTTCTACCACTGCTGCATGATTTGTCACAGCAGATGGTTCAAGCTGGTCATCAACAGCAAATTCTAAAAATCTACAGGGATACACGTTCAGTTGTTCTGGAAGAAAGCCTACGGAAACTGGGAGTTGAAAAACTTAGCAAAGATGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTCAAACTACTGTTTGCTGGAGAAAGAAAAGTGTGTGATCAAATATTTGAAGGCTTTGAATCGCTTAGAGATCAATCCTTTGCAGAGGTTACGTCTAGTAGTGTGTCTGTGCTATTCAGTTTTGGGGAGGCGATTGCTAAAAGCAAGAGGTCACCAGAAAAGTTATTTGTACTTCTGGACATGTATGAAATAATGCGAGAGCTTCACTCTGAGATTGAGACAATTTTTAAGGGTAAAGCATGCAACGAGATCAGAGAATCTGCATCGGGTTTGACCAAACGGCTTGCACAGACAGCTAAGGATACATTTGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCAACCAAAACTGCGGTGTTGGATGGAACTGTTCATCCTCTAACAAGCTATGTGATTAATTATGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAACAGCTTTTCCAAGAATTTGCAGATAGTGGTCAAACGAGTTCGGAATTGGCTACTGTCACAATGCAAATAATGCAGGCTCTTCAATCTAATTTGGATGGAAAATCTAAGAATTACAGAGATCCTGCTTTGACTCACTTATTCCTCATGAACAACATTCATTATATAGTTAGATCTGTCCGCAGATCTGAAGCCAAAGACTTGCTAGGGGATGATTGGGTTCAGAGGCATAGGAGAGTTGTACAACAACATGCAAATCAGTATAAAAGGAACGCTTGGGGAAAGATTCTGCAATGCCTCTCTGTTCAAGGGTTAACTTCATCTGGGGGCGGCAGCGTACCTGGAATAGATGGAGGAAACAGTAGCGGAGTTTCTAGGGCACTTATTAAAGACAGGTTCAAAACTTTCAACATGCAATTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACCGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCGTTCCTAAAACGTTTCGGGCCAATAGTTGATGGTGGAAAGAATCCCCAAAAGTATGTCAGATACCAGCCAGAGGATCTCGAACGGATGCTCGGAGAATTTTTCGAGGGGAAGAACTTGAGTGAACCCAAGCGGTAG 1962 42.81 MGVPAASGDDFLRERAAKMRESMLKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEVILAQFDLSRQAETKILKGPHEDLESYLGAIDQLRNIIKFFSSHKGFKSSEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSESPGHQDDSGGKNPSSNHHSAHHDNNLENAVYTPPTLIPPRVLPLLHDLSQQMVQAGHQQQILKIYRDTRSVVLEESLRKLGVEKLSKDDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACNEIRESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFADSGQTSSELATVTMQIMQALQSNLDGKSKNYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWGKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPIVDGGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKR 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20415757 20422315 - MC09g1439 Mch9g1872 698754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1872 653 Pfam Exocyst complex component Exo70 N-terminal 71 153 - -
Mch9g1872 653 MobiDBLite consensus disorder prediction 169 207 - -
Mch9g1872 653 FunFam Exocyst subunit Exo70 family protein 86 651 - -
Mch9g1872 653 SUPERFAMILY Cullin repeat-like 78 644 IPR016159 -
Mch9g1872 653 Pfam Exo70 exocyst complex subunit C-terminal 281 640 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Mch9g1872 653 Gene3D Exocyst complex component Exo70 76 653 - -
Mch9g1872 653 PANTHER EXOCYST COMPLEX PROTEIN EXO70 43 646 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch9g1872 653 MobiDBLite consensus disorder prediction 171 192 - -
Mch9g1872 653 Coils Coil 130 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0977 Mch-Chr1:12901358 Mch9g1872 Mch-Chr9:20415757 0 dispersed
Mch8g1301 Mch-Chr8:9489431 Mch9g1872 Mch-Chr9:20415757 1.99E-118 dispersed
Mch8g2403 Mch-Chr8:27097657 Mch9g1872 Mch-Chr9:20415757 7.52E-78 dispersed
Mch9g1872 Mch-Chr9:20415757 Mch6g0064 Mch-Chr6:380659 1.60E-113 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1872 K07195 - csv:101206262 1185.63