Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1938 ATGGCTTCCAGAGAAGGGAGGCGTCATAATCATCATCATCATCATCACAATCTGGTGCCTCTTGCTGCTTTGATCAGTAAAGAGGTGAGGAGTGAGAGGTTGGAGAAACCCACTATAAGATATGGGAATGCAGCGCAGTCTAAAAAGGGAGAAGATTATTTTCTCATGAAAACTGATTGTCAGCGAGTTCCTGGGAACCCTTCATCCACTTTCTCTGTATTCGCTATATTTGATGGACACAATGGAAATGCTGCAGCAATTTTCACGAGGGAACATTTGTTGAGCCATGTCTTGAGCGCGATTCCCCGTGGTCTCGGGCAGGAGGAGTGGCTTCAAGCGCTGCCACGAGCGTTGGTTGCTGGATTTGTGAAGACAGACAAGGAGTTCCAGAGCAGAGGCGAAACTTCTGGAACTACAGCTACGTTTGTAATCATCGATAGATGGACAGTGACAGTAGCGTCGGTTGGAGATTCCCGATGCATTTTAGATACTCAGGGTGGTGCTGTATCTGCTTTGACGGTTGATCATAGACTTGAAGAGAATGTTGAGGAGAGGGAACGTGTAACTGCAAGTGGTGGGGAAATCGGAAGATTGAGCATTGTCGGTGGCGCTGAGATTGGCCCCCTCCGTTGTTGGCCCGGAGGCTTATGCCTTTCTCGGTCTATTGGAGACATGGATGTGGGGGAGTTTATAGTTCCAATTCCATTTGTGAAACAAGTGAAGTTATCGAATGCTGGTGGGAGGCTTATAATTGCTTCCGATGGCATCTGGGATGCGCTATCATCAGATATGGCTGCAAAGTCTTGCCGTGGACTGCCTGCAGAGCTTGCTGCTAGGCAAGTTGTGAAGGAAGCTTTAAGAACAAGAGGCTTGAAGGATGATACGACCTGCATAGTAGTTGACATAATTCCTCCTGATAATTCAGCACAGTCTTCTCCTCCTCCAAAGAAACAAAGCGTACTGAAATCGCTATTATTCAGAAAAAAGTCCCACAGTTCTAATAAGCTATCAAAGAGGCTATCAGCTATCGGTCTCGTGGAAGAATTATTCGAAGACGGGTCCGCCATGCTGGCTGAAAGGCTTGGAACTGTGGAATTGAGTGGATCTGGACATGGCACACCCAGTCTATTTACTTGTGCTGTATGTCAAGTAGATCTTGCTCCCAGTGAGGGCATCTCTGTTCATGCTGGTTCCATCTTCTCCACCAGCTCAAAGCCATGGCAAGGCCCTTTCCTCTGCGCCGATTGTCGAAACAAGAAGGACGCCATGGAGGGAAAACGTCCCAGCGGAGTGAGAGTGGCATAG 1305 47.97 MASREGRRHNHHHHHHNLVPLAALISKEVRSERLEKPTIRYGNAAQSKKGEDYFLMKTDCQRVPGNPSSTFSVFAIFDGHNGNAAAIFTREHLLSHVLSAIPRGLGQEEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIIDRWTVTVASVGDSRCILDTQGGAVSALTVDHRLEENVEERERVTASGGEIGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPFVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPDNSAQSSPPPKKQSVLKSLLFRKKSHSSNKLSKRLSAIGLVEELFEDGSAMLAERLGTVELSGSGHGTPSLFTCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVRVA 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20863772 20867798 + MC09g_new0439 Mch9g1938 698820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1938 434 Gene3D - 41 309 IPR036457 -
Mch9g1938 434 ProSiteProfiles PPM-type phosphatase domain profile. 33 302 IPR001932 -
Mch9g1938 434 SMART PP2C_SIG_2 35 302 IPR001932 -
Mch9g1938 434 SUPERFAMILY PP2C-like 46 302 IPR036457 -
Mch9g1938 434 PANTHER PROTEIN PHOSPHATASE 41 301 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch9g1938 434 CDD PP2Cc 48 302 IPR001932 -
Mch9g1938 434 SMART PP2C_4 30 300 IPR001932 -
Mch9g1938 434 Pfam Protein phosphatase 2C 66 287 IPR001932 -
Mch9g1938 434 FunFam probable protein phosphatase 2C 5 40 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2791 Mch-Chr6:29345587 Mch9g1938 Mch-Chr9:20863772 5.83E-209 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1938 - - - 0.0