Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1958 ATGAGCTGCAATGGGTGTCGAATTCTCCGAAAAGGTTGCAGCGATGAGTGTGTAATTAGGCCATGCCTTGAATGGATATCGTCGCCGGATTCTCAAGCCAACGCCACCATTTTCCTCGCCAAGTTCTACGGCCGCGCCGGCCTCTTCAACCTCATCACCGCCGCTTCTCAACACCTCCGCCCTGCAATTTTCAAGTCGCTGCTGTACGAGGCGTGCGGGCGGATGGTGAATCCAGTGTACGGTTCCGTCGGATTGCTCTGCTCCGGCGACTGGGACAGGTGTCAGGCCGCCGTCGACGCCGTCTTGACCGGAACCATGAACGTCGAAACCAACGCGCCGCCTTCCAATGCCAATGTTTTATGCTGCGACATCCGCCACGTCTGTACCGACACCAACTTGGCCGCTCCCGGCGAGCCTCGCAAGGTCAAGGCTCGAAGCCGGTTCAAGAAGCCCGACCACCGGACCAAACCAAAATCTGGACCGGCTGAAATTTTGGGGAGCGGGTCTAATTGGGCAGAGTCGGGGGCGAACCGCCAGATTGAAATGGTGGATGCTTTGACGGTGAACCGGGGGAAACCAAACCGAGTTTTGAGGCATGGAAGCCGGTCTGAGAGGGTGGATAATGTTGAGCTGGAACTGACTCTTAACTCGGCTCAA 657 57.23 MSCNGCRILRKGCSDECVIRPCLEWISSPDSQANATIFLAKFYGRAGLFNLITAASQHLRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDRCQAAVDAVLTGTMNVETNAPPSNANVLCCDIRHVCTDTNLAAPGEPRKVKARSRFKKPDHRTKPKSGPAEILGSGSNWAESGANRQIEMVDALTVNRGKPNRVLRHGSRSERVDNVELELTLNSAQ 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20983539 20984917 + MC09g1518 Mch9g1958 698840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1958 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 215 - GO:0010468(PANTHER)
Mch9g1958 219 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Mch9g1958 219 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Mch9g1958 219 MobiDBLite consensus disorder prediction 139 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1294 Mch-Chr8:9423086 Mch9g1958 Mch-Chr9:20983539 6.64E-64 dispersed
Mch6g0374 Mch-Chr6:2484246 Mch9g1958 Mch-Chr9:20983539 9.53E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44100 PF03195 LOB 4.30E-23 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1958 - - - 0.0