Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g1999 | ATGGCCGCAACATTGGCTTCACTGGTCCCATTACTCATCTTTGCCAGAATCTTTGCTCTGCTGGTCGCCGTTCTGGTCTTCGTTTGGGCTCTTGCTTTCAGTTCCAGCTTCCATCATCGCTCCCCCTCCCGGGAAGATCATATCTTCGATGTTCTGCATCCTTTGTTCATGGTAATTGGTCTCATTCTCCTCAGCGGTGAAGCAATTTTGGTCCATAGTTGGCTGCCGGGTTCGAGGAATTTGAGGAAATCTGTTCATCTGAGTCTTCAAGGGCTGGCTTTGGCTTCTGGGATTATCGGAATTTGGACCAAATTTCATAGGGATCGTAGCTTTTTGGCTAATTTCCACAGCCTGCATTCTTGGATGGGTTTACTTGCTGTCACTTTGTTCGGAGCTCAGTGGATGATGGGTTTTCTGAGCTTCTGGCATTGGAGGGAGGTGAGGGGAACAAGAGAAAGAGTGCTGCCATGGCATGTGTTTGTTGGGTTATACAGTTATGGATTGGCAGTGGCAACGGCAGAAACAGGGCTTCTTGAGAAGTTGACATTGTTGCAAACTAAGAGAAATGTCCCTAAGAAAGGTCCTGAAGCTATGGTTGTCAACAGTCTGGGACTGGCATTGGCTTTGCTTAGTGGAATTGTGATTCTCACTGCTATATCTCCCAAATATCCTCCTTCCCTTCCCTCTAAACATCCATTTTTCTCTAATTCCAAGCTCTTGCCTTCTTAA | 729 | 46.64 | MAATLASLVPLLIFARIFALLVAVLVFVWALAFSSSFHHRSPSREDHIFDVLHPLFMVIGLILLSGEAILVHSWLPGSRNLRKSVHLSLQGLALASGIIGIWTKFHRDRSFLANFHSLHSWMGLLAVTLFGAQWMMGFLSFWHWREVRGTRERVLPWHVFVGLYSYGLAVATAETGLLEKLTLLQTKRNVPKKGPEAMVVNSLGLALALLSGIVILTAISPKYPPSLPSKHPFFSNSKLLPS | 242 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 21299990 | 21302447 | - | MC09g1559 | Mch9g1999 | 698881 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g1999 | 242 | Gene3D | - | 1 | 224 | - | - | |
| Mch9g1999 | 242 | SMART | 561_7 | 52 | 177 | IPR006593 | - | |
| Mch9g1999 | 242 | Pfam | Eukaryotic cytochrome b561 | 52 | 182 | IPR006593 | - | |
| Mch9g1999 | 242 | ProSiteProfiles | Cytochrome b561 domain profile. | 14 | 219 | IPR006593 | - | |
| Mch9g1999 | 242 | PANTHER | CYTOCHROME B561-RELATED | 2 | 223 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Mch9g1999 | 242 | FunFam | Cytochrome b reductase 1 | 4 | 226 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch9g1251 | Mch-Chr9:14298809 | Mch9g1999 | Mch-Chr9:21299990 | 5.39E-34 | dispersed | |
| Mch4g2425 | Mch-Chr4:25229350 | Mch9g1999 | Mch-Chr9:21299990 | 2.26E-60 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch9g1999 | K08360 | - | csv:101205948 | 378.252 |