Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2015 AAGAAAATGAGCGGCGGCAGAAGGAGAAAGCTGCATTTTAGCAAGATCTACTCGTTTGCATGTGGGAAAGCTTCTTTAAAGGATGACCATTCACAACTTGGGGGTCCGGGGTTTTCCCGGGTGGTCTTCTGCAATGAACCAGATTGTTTCGAGGCAGAAATTCGTAACTACATGGACAATTATGTGAGTACCACCAAGTATACTCTAGCTACTTTCCTGCCCAAGTCCTTGTTTGAGCAATTCAGGAGGGTAGCCAATTTCTACTTTCTGGTCAGTGGGATCCTTGCCTTTACTCCCCTTGCTCCTTATACGGCTGTCAGCGCGATTATCCCTCTTATTCTTGTCATTTCGGCTACAATGATCAAAGAAGGGATCGAAGATTTGAGGCGAAAAAAGCAGGATATTGAGGTTAACAATAGGAAGGTTAAAGTGCATCAAGGTGATGGAATTTTTGCTTATACAGAGTGGAAAAATCTGAGGGTGGGCAATATTGTGAAAGTGGAGAAGGATGAATTCTTTCCAGCGGATATCGTCCTTCTTTCGTCCAGTTATGAGGATGCAATCTGCTATGTTGAGACAATGAACCTAGATGGTGAGACGAATTTGAAACTAAAACAAGCATTGGAGGTAACTTTGGATATGCACGAGGATTCTATCTTCAGAAGCTTTAAGGCTATCATAAAATGTGAGGATCCAAATGCAAATTTATACTCTTTTGTTGGTAGTATGGAGTTGGAAGAGCAACAATATCCTTTATCTCCCCAACAACTACTTCTTCGAGACTCTAAACTCCGGAATACAGATTACATATATGGGGTTGTTGTCTTTACTGGTCGTGACACGAAGGTTATTCAAAATTCTACCGATCCCCCTTCAAAGAGAAGCAAAGTTGAGAGAAGAATGGATAAAATTATATATTGTCTATTCTGTCTTCTATTTTTGCTTGCTCTTGTAGGATCTATATTTTTTGGCCTTGAGACTGATGATGATTTGGAAAATGGGAGAATGAAGAGATGGTATCTCAGGCCTGATGATGCTAAAGTTTTCTTTGATCCAGAAAGGTTTCGACTAGCTGCAATTTTCCATTTTCTTACCGCACTGATGTTATATAACTACTTCATTCCAATCTCACTGTATGTATCTATAGAAATTGTCAAAGTTCTTCAGAGCATATTTATCAATCAAGATATTAATATGTATTATGAAGAAGCCAATAAACCTGCACGTGCTCGCACCTCAAATTTGAATGAAGAACTTGGTCAAGTCGATACAATACTTTCTGACAAGACTGGAACTCTGACCTGTAATTCAATGGAGTTCATTAAATGTTCTGTGGCAGGGAGGGCTTATGGCCGTGGTTTCACAGAGGTAGAAAGGGCTATAGGTAGACGAGAAGATTCACTAGAAGCCGTAAATGGGGGGAATCACCATGAGAATGTCAACAACAAAACTTCACATATCAAGGGCTTTAATTTTAAGGATGATAGGATTATGAATGGAAACTGGGTTAATGAGCCTCATGCAAATGTCATCCAAATGTTTTTCCGTCTTCTTGCGACTTGTCATACAGCAATACCTGAAATCAACGAGGACAACGGAGAGGTTACTTACGAGGCTGAATCACCGGATGAAGCAGCATTTGTGATTGCAGCTAGAGAACTCGGCTTTGGGTTCTACAAAAGAACACAGACAACCATATCACTGCATGAGTTTGATCCTTCGTTAGGCAAGAAAGTTGATAGGACATATAAACTTCTGCATGTTTTGGAGTTTAATAGCTCAAGAAAACGGATGTCTGTGATAGTAAGAAACGAGGAGGAGAAAATATTATTATTGTGTAAAGGTGCAGACAGTATCATGTTTGAAAGGCTTGGAAAGAATGGAAGGGAGTTTGAAGAGGAGACCAAGAAACATGTCAGTGAGTATGCCGATGCAGGGTTGAGGACTTTGATACTTGCCTATCGCGAGCTTGAAGAGGAAGAACTCAGGGAATTTGATGACATGTTCACCAAGGCCAAAAGTTCTGTTAGTGCAGACCGGGAATCATTGATCGATAAAGTAACCGACAAAATTGAGAGAAATTTGATTCTTCTTGGAGCCACTGCAGTTGAGGACAAGCTCCAACATGGGGTTCCCGAGTGCATTGACAAGCTTGCTCAGGCAGGAATTAAGATTTGGGTATTGACTGGGGACAAAATGGAGACTGCCATAAATATTGGTTTTGCCTGTAGCTTACTAAGACAAGATATGAAGCAGATTGTTGTTACTCTGGAGACATTGGAAATTCAGACAATGGAAAAGACGGGAGATAAAGCTTCCATCATCAAGATTAATCGAGGGAGAGCTCAGATCACTTCGTTAAATGGGAGATCCGAGGCATTTGCATTAATTATTGATGGAAAATCACTTTCTTATGCTTTGGAGGATAATATGAAGACGGTTTTTCTCGAGCTAGCAATTTGTTGTGATTCTGTTATTTGCTGCCGTTCATCTCCAAAACAGAAGGCGCTGGTAACAAGGTTGGTTAAATCTGGGACACGGAGAACAACTTTAGCTATTGGCGATGGTGCCAATGATGTAGGAATGCTTCAAGAAGCGGATATTGGAGTCGGAATCAGTGGTGCAGAAGGAATGCAGGCCGTTATGTCGAGTGATGTTGCAATTGCACAGTTTAGATATTTGGAGCGCCTGCTACTTGTGCATGGACATTGGTGCTACAGAAGAATATCATCAATGATTTGCTACTTTTTCTATAAGAATATTACTTTTGGTTTTACCATATTCTTATATGAAGCATTCACATCATTCTCTGGGCAACCTGCATATAATGATTGGTTTTTATCACTTTACAATGTTTTCTTCTCGTCACTTCCGGTGGTAGCTTTGGGAGTTTTTGATCAGGACGTGTCTGCAAGACACTGCCTCCAGTTTCCTCTCTTATACCAACAAGGGGTGCAGAATGTTCTTTTCAGCTGGCTCCGAATACTCAGTTGGATGTTTAATGGATTGGGCAGTGCCGTGATCATCTTCTTCCTCTGCACTGAAGCGCTCAAGGATCAGGCATTCAACTCCGAAGGAAAAACTGCAGGGCGGGATATTCTAGGTGCAACGATGTACTCTTGTGTCGTTTGGGTTGTGAACTTACAAATGGCGCTCGCCGTTAGTTACTTCACCTTGATACAACATCTTTTCATCTGGGGTTCGATTTCGATCTGGTACATTTTTCTCCTGATTTACGGGTCCATGACCCCCACCTTCTCAACCAATGCTTACAAGATCTTCACCGAAGTCCTTGCACCTGGCCCTTCCTACTGGCTTGTGCTTCTCTTTGTGGTGATCACAACACTCATTCCTTACTTCTCCTACTCAGCCATACAGATGAGGTTCTTTCCCATGTATCATCAAATGATTTTATGGATAAGGAGTGAAGGACAACTCGACAACCAAGAGTACTGCGATATGTTGCGGAGGGGCACATTCCGATCAACGAGCGTGGGCTGCACAGCACGTTTAGCAGCCCAAATGAGCCGCTCAGAAGAGAGAAACCAGAGTGCTACTTGA 3561 41.84 KKMSGGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPDCFEAEIRNYMDNYVSTTKYTLATFLPKSLFEQFRRVANFYFLVSGILAFTPLAPYTAVSAIIPLILVISATMIKEGIEDLRRKKQDIEVNNRKVKVHQGDGIFAYTEWKNLRVGNIVKVEKDEFFPADIVLLSSSYEDAICYVETMNLDGETNLKLKQALEVTLDMHEDSIFRSFKAIIKCEDPNANLYSFVGSMELEEQQYPLSPQQLLLRDSKLRNTDYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERRMDKIIYCLFCLLFLLALVGSIFFGLETDDDLENGRMKRWYLRPDDAKVFFDPERFRLAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDINMYYEEANKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGRAYGRGFTEVERAIGRREDSLEAVNGGNHHENVNNKTSHIKGFNFKDDRIMNGNWVNEPHANVIQMFFRLLATCHTAIPEINEDNGEVTYEAESPDEAAFVIAARELGFGFYKRTQTTISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRNEEEKILLLCKGADSIMFERLGKNGREFEEETKKHVSEYADAGLRTLILAYRELEEEELREFDDMFTKAKSSVSADRESLIDKVTDKIERNLILLGATAVEDKLQHGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIVVTLETLEIQTMEKTGDKASIIKINRGRAQITSLNGRSEAFALIIDGKSLSYALEDNMKTVFLELAICCDSVICCRSSPKQKALVTRLVKSGTRRTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDVAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARHCLQFPLLYQQGVQNVLFSWLRILSWMFNGLGSAVIIFFLCTEALKDQAFNSEGKTAGRDILGATMYSCVVWVVNLQMALAVSYFTLIQHLFIWGSISIWYIFLLIYGSMTPTFSTNAYKIFTEVLAPGPSYWLVLLFVVITTLIPYFSYSAIQMRFFPMYHQMILWIRSEGQLDNQEYCDMLRRGTFRSTSVGCTARLAAQMSRSEERNQSAT 1186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21431339 21439079 + MC09g1571 Mch9g2015 698897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2015 1186 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 666 IPR023299 GO:0000166(InterPro)
Mch9g2015 1186 FunFam Phospholipid-transporting ATPase 698 893 - -
Mch9g2015 1186 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Mch9g2015 1186 FunFam Phospholipid-transporting ATPase 540 698 - -
Mch9g2015 1186 SUPERFAMILY HAD-like 421 908 IPR036412 -
Mch9g2015 1186 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Mch9g2015 1186 Gene3D - 698 893 IPR023214 -
Mch9g2015 1186 Gene3D - 546 697 IPR023299 GO:0000166(InterPro)
Mch9g2015 1186 NCBIfam phospholipid-translocating P-type ATPase 57 1137 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Mch9g2015 1186 SFLD C1.7: P-type atpase like 410 904 - -
Mch9g2015 1186 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Mch9g2015 1186 Pfam Phospholipid-translocating P-type ATPase C-terminal 881 1131 IPR032630 -
Mch9g2015 1186 CDD P-type_ATPase_APLT_Dnf-like 59 1013 - -
Mch9g2015 1186 FunFam Phospholipid-transporting ATPase 118 288 - -
Mch9g2015 1186 Coils Coil 125 145 - -
Mch9g2015 1186 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Mch9g2015 1186 PRINTS P-type cation-transporting ATPase superfamily signature 853 872 - -
Mch9g2015 1186 SFLD p-type atpase 410 904 IPR044492 -
Mch9g2015 1186 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1131 IPR023298 -
Mch9g2015 1186 Gene3D - 118 288 - -
Mch9g2015 1186 Pfam Cation transport ATPase (P-type) 520 624 - -
Mch9g2015 1186 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1139 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Mch9g2015 1186 NCBIfam HAD-IC family P-type ATPase 819 935 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0241 Mch-Chr9:1822816 Mch9g2015 Mch-Chr9:21431339 0 dispersed
Mch9g2015 Mch-Chr9:21431339 Mch9g2189 Mch-Chr9:22482405 3.22e-319 dispersed
Mch4g1104 Mch-Chr4:10847867 Mch9g2015 Mch-Chr9:21431339 0 transposed
Mch3g1659 Mch-Chr3:18321366 Mch9g2015 Mch-Chr9:21431339 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2015 K01530 - csv:101207148 2081.22