Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2017 ATGGCATCCGTATCACCCGCGCCAAATTCATCTCCATCGCCGACTTCTCCCTCCACTCAATCTCCGCCGCCTCCCGTCGTATCTACTCCGCCGTCCAATTCTCCGCCACCATCGCCGCCACAACATCCTTCTACGCCGCCGCGACAATCGCCGCCTCCGAATTCTTCTGACCCCACGACTCCTACTCCGTCCCCACCAGGTCCGCCTGCTACTTCACCTCCCCCTGCTTCCGGAACTCCGCCCCCATTAACACCCGCATTATCTCCTCCGCCGCCTCGGACCGTTCCGCCGGCAACGCCGCCACCAACTCCATCCAATCCTCCACCCCCATCAACACCGGACCCTCCATCGCCATCAGCAACGCCACCAGTAACATTCACTCCGCCGCCAACGCCGTCTAATCCACCCCCGAATCCATCTCCACCTCCTGCGGCAGAGCCTCCAAAAACCCCTCCTCCACAATCATCAAACCCACCTGAAAACTCACCTCCGCCACCGCCATCACCACAAGCAAACCCACCGGATAATTCACCGCCGCCACCGCAGCCCACAAACCCACCTGAGAATTCACCCCCTCCAGAAACTTCACCTCCACCCCCAGCATCAATACCTCCAAGAAATGCACCTCCACCTCCTAGGCTTGCTCCTCCTCCTGGTGACCCCTCACCTTCAAGTCCTCCTCCCAAGTCATTGCCGCCCTCATCTATAGCACCTCCTCCGCCGTCACATTTTCCCCCTCCATTACCGTCTAAAACCCCAACATTACCGTCAGGAAACCGCACGGACGATGGTTCTGCTCCTAATGTTGGAGTAGACCCGAATTCCAACAGCAATGGAGGCATTAGTACTGGAGGTGCAATTGCGATAGGTGTAGTGGCTGGAATCGTAGCGCTTTCCATTGTTGGGTTTGTTTTATGGTACATTAGGAAGCCAAGGAGAAGGGATTCTGGGCGTGGAGGTTTCATTATGCCGTCTTCTCTGGGCTCCTCGCCTAAGTCAGAATCATCCCTTATGAAGGTCCATTCCACACCTCACCAAGACAGACAAGCCAGTGGCAGTGGCAGTGGTGCTTCAAAGGATCTTGGTGGGTTAGGCAATTCAAGGGCATTGTTTACATATGAAGAACTCTTCAGAGCAACAAATGCATTTTCTGCTCAGAATCTTTTAGGAGAAGGTGGATTTGGTTCTGTTTATAAAGGATGTCTACCAGATGGAAGAGAGGTTGCAGTGAAGGAACTAAAGGTTGGTGGTAGTCAGGGTGAGCAGGAATTCAAAGCTGAGGTCGAGATAATCGGTCGTGTTCACCACCGCCATTTAGTTTCTCTAGTTGGCTACTGCATTTTAGAACACCAAAGGTTGCTGGTGTATGATTATGTCCCTAACAATTCCCTTTACTACCATCTCCATCTTAAAGGTGAGGGTGAGCCTGTTCTAGATTGGGAAAAACGCATCAAGATTGCAGCTGGTGCAGCCCGTGGAATAGCTTACCTTCATGAAGACTGCCATCCTCGAATTATCCACCGGGATATAAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCAGACTTTGGGCTAGCTAAATTAGCTCTCGACGCACAAACTCATATAACCACCCGTGTCGTAGGAACTTTCGGATATGTTGCCCCTGAATATGCATCAAGTGGAAAATTAACTGAGAGATCGGATGTATATTCTTTTGGAGTCGTGCTTCTTGAGCTGATTACTGGTCGAAAGGCTGTGGATGCATCCCAGCCGATGGGGGATGAGAGCCTTGTCGAATGGGCTCGGCCTTTACTAAACCATGCACTCGACAGCCAAGATTTCGAGCGATTGGTGGACCCGAGGCTTGAAAGGAAATATGTTGAGAGTGAAGTGCTGAGGATGATAGGAATAGCTGCAGCTTGCGTGCGGCATGCATCTGCCAAGAGACCGCAGATGGGACAGGTTGTTAGAACTTTTGATAGTTTAGCCACTGTAGATTTAAGTAATGGGATGAGGTTCGGGGAGAGTCGAGCTTTCGACTCTGCTCAACAATCTGCAGAGATTAGATTTTTCCAAATGCTGGCATTTGGTAACCAAGATTACAGTTCAGACTTTTATAGCCAAGGTAGCTCAAATGCTGATAGAAGAGGAGACTTGTAG 2157 50.81 MASVSPAPNSSPSPTSPSTQSPPPPVVSTPPSNSPPPSPPQHPSTPPRQSPPPNSSDPTTPTPSPPGPPATSPPPASGTPPPLTPALSPPPPRTVPPATPPPTPSNPPPPSTPDPPSPSATPPVTFTPPPTPSNPPPNPSPPPAAEPPKTPPPQSSNPPENSPPPPPSPQANPPDNSPPPPQPTNPPENSPPPETSPPPPASIPPRNAPPPPRLAPPPGDPSPSSPPPKSLPPSSIAPPPPSHFPPPLPSKTPTLPSGNRTDDGSAPNVGVDPNSNSNGGISTGGAIAIGVVAGIVALSIVGFVLWYIRKPRRRDSGRGGFIMPSSLGSSPKSESSLMKVHSTPHQDRQASGSGSGASKDLGGLGNSRALFTYEELFRATNAFSAQNLLGEGGFGSVYKGCLPDGREVAVKELKVGGSQGEQEFKAEVEIIGRVHHRHLVSLVGYCILEHQRLLVYDYVPNNSLYYHLHLKGEGEPVLDWEKRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDAQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDASQPMGDESLVEWARPLLNHALDSQDFERLVDPRLERKYVESEVLRMIGIAAACVRHASAKRPQMGQVVRTFDSLATVDLSNGMRFGESRAFDSAQQSAEIRFFQMLAFGNQDYSSDFYSQGSSNADRRGDL 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21439862 21444647 - MC09g1573 Mch9g2017 698899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2017 718 Gene3D Transferase(Phosphotransferase) domain 1 459 672 - -
Mch9g2017 718 CDD STKc_IRAK 389 661 - -
Mch9g2017 718 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524(InterPro)
Mch9g2017 718 MobiDBLite consensus disorder prediction 1 277 - -
Mch9g2017 718 SUPERFAMILY Protein kinase-like (PK-like) 367 657 IPR011009 -
Mch9g2017 718 MobiDBLite consensus disorder prediction 326 356 - -
Mch9g2017 718 FunFam proline-rich receptor-like protein kinase PERK8 459 672 - -
Mch9g2017 718 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 266 686 IPR047117 -
Mch9g2017 718 SMART serkin_6 383 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2017 718 Pfam Protein kinase domain 385 592 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2017 718 MobiDBLite consensus disorder prediction 10 253 - -
Mch9g2017 718 FunFam Proline-rich receptor-like protein kinase PERK8 356 458 - -
Mch9g2017 718 PRINTS Proline rich extensin signature 19 40 - -
Mch9g2017 718 PRINTS Proline rich extensin signature 5 17 - -
Mch9g2017 718 PRINTS Proline rich extensin signature 40 56 - -
Mch9g2017 718 PRINTS Proline rich extensin signature 57 74 - -
Mch9g2017 718 MobiDBLite consensus disorder prediction 317 360 - -
Mch9g2017 718 ProSiteProfiles Protein kinase domain profile. 383 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2017 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g2017 718 Gene3D Phosphorylase Kinase; domain 1 353 458 - -
Mch9g2017 718 MobiDBLite consensus disorder prediction 254 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1898 Mch-Chr1:18923657 Mch9g2017 Mch-Chr9:21439862 8.49E-48 dispersed
Mch2g0215 Mch-Chr2:1636943 Mch9g2017 Mch-Chr9:21439862 8.81E-34 dispersed
Mch4g1606 Mch-Chr4:19285858 Mch9g2017 Mch-Chr9:21439862 2.93E-64 dispersed
Mch6g2725 Mch-Chr6:28863433 Mch9g2017 Mch-Chr9:21439862 4.31E-50 dispersed
Mch8g1108 Mch-Chr8:7826337 Mch9g2017 Mch-Chr9:21439862 1.54E-87 dispersed
Mch8g2131 Mch-Chr8:24431334 Mch9g2017 Mch-Chr9:21439862 8.14E-97 dispersed
Mch8g2398 Mch-Chr8:27056801 Mch9g2017 Mch-Chr9:21439862 5.09E-62 dispersed
Mch9g0491 Mch-Chr9:3621434 Mch9g2017 Mch-Chr9:21439862 9.05E-76 dispersed
Mch9g2017 Mch-Chr9:21439862 Mch9g2244 Mch-Chr9:22849797 2.29E-157 dispersed
Mch4g1610 Mch-Chr4:19309008 Mch9g2017 Mch-Chr9:21439862 6.45E-56 transposed
Mch9g1468 Mch-Chr9:17112653 Mch9g2017 Mch-Chr9:21439862 3.89E-63 transposed
Mch4g2421 Mch-Chr4:25193825 Mch9g2017 Mch-Chr9:21439862 5.38E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77715 PF00069 Pkinase 7.50E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2017 - - - 0.0