Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g2017 | ATGGCATCCGTATCACCCGCGCCAAATTCATCTCCATCGCCGACTTCTCCCTCCACTCAATCTCCGCCGCCTCCCGTCGTATCTACTCCGCCGTCCAATTCTCCGCCACCATCGCCGCCACAACATCCTTCTACGCCGCCGCGACAATCGCCGCCTCCGAATTCTTCTGACCCCACGACTCCTACTCCGTCCCCACCAGGTCCGCCTGCTACTTCACCTCCCCCTGCTTCCGGAACTCCGCCCCCATTAACACCCGCATTATCTCCTCCGCCGCCTCGGACCGTTCCGCCGGCAACGCCGCCACCAACTCCATCCAATCCTCCACCCCCATCAACACCGGACCCTCCATCGCCATCAGCAACGCCACCAGTAACATTCACTCCGCCGCCAACGCCGTCTAATCCACCCCCGAATCCATCTCCACCTCCTGCGGCAGAGCCTCCAAAAACCCCTCCTCCACAATCATCAAACCCACCTGAAAACTCACCTCCGCCACCGCCATCACCACAAGCAAACCCACCGGATAATTCACCGCCGCCACCGCAGCCCACAAACCCACCTGAGAATTCACCCCCTCCAGAAACTTCACCTCCACCCCCAGCATCAATACCTCCAAGAAATGCACCTCCACCTCCTAGGCTTGCTCCTCCTCCTGGTGACCCCTCACCTTCAAGTCCTCCTCCCAAGTCATTGCCGCCCTCATCTATAGCACCTCCTCCGCCGTCACATTTTCCCCCTCCATTACCGTCTAAAACCCCAACATTACCGTCAGGAAACCGCACGGACGATGGTTCTGCTCCTAATGTTGGAGTAGACCCGAATTCCAACAGCAATGGAGGCATTAGTACTGGAGGTGCAATTGCGATAGGTGTAGTGGCTGGAATCGTAGCGCTTTCCATTGTTGGGTTTGTTTTATGGTACATTAGGAAGCCAAGGAGAAGGGATTCTGGGCGTGGAGGTTTCATTATGCCGTCTTCTCTGGGCTCCTCGCCTAAGTCAGAATCATCCCTTATGAAGGTCCATTCCACACCTCACCAAGACAGACAAGCCAGTGGCAGTGGCAGTGGTGCTTCAAAGGATCTTGGTGGGTTAGGCAATTCAAGGGCATTGTTTACATATGAAGAACTCTTCAGAGCAACAAATGCATTTTCTGCTCAGAATCTTTTAGGAGAAGGTGGATTTGGTTCTGTTTATAAAGGATGTCTACCAGATGGAAGAGAGGTTGCAGTGAAGGAACTAAAGGTTGGTGGTAGTCAGGGTGAGCAGGAATTCAAAGCTGAGGTCGAGATAATCGGTCGTGTTCACCACCGCCATTTAGTTTCTCTAGTTGGCTACTGCATTTTAGAACACCAAAGGTTGCTGGTGTATGATTATGTCCCTAACAATTCCCTTTACTACCATCTCCATCTTAAAGGTGAGGGTGAGCCTGTTCTAGATTGGGAAAAACGCATCAAGATTGCAGCTGGTGCAGCCCGTGGAATAGCTTACCTTCATGAAGACTGCCATCCTCGAATTATCCACCGGGATATAAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCAGACTTTGGGCTAGCTAAATTAGCTCTCGACGCACAAACTCATATAACCACCCGTGTCGTAGGAACTTTCGGATATGTTGCCCCTGAATATGCATCAAGTGGAAAATTAACTGAGAGATCGGATGTATATTCTTTTGGAGTCGTGCTTCTTGAGCTGATTACTGGTCGAAAGGCTGTGGATGCATCCCAGCCGATGGGGGATGAGAGCCTTGTCGAATGGGCTCGGCCTTTACTAAACCATGCACTCGACAGCCAAGATTTCGAGCGATTGGTGGACCCGAGGCTTGAAAGGAAATATGTTGAGAGTGAAGTGCTGAGGATGATAGGAATAGCTGCAGCTTGCGTGCGGCATGCATCTGCCAAGAGACCGCAGATGGGACAGGTTGTTAGAACTTTTGATAGTTTAGCCACTGTAGATTTAAGTAATGGGATGAGGTTCGGGGAGAGTCGAGCTTTCGACTCTGCTCAACAATCTGCAGAGATTAGATTTTTCCAAATGCTGGCATTTGGTAACCAAGATTACAGTTCAGACTTTTATAGCCAAGGTAGCTCAAATGCTGATAGAAGAGGAGACTTGTAG | 2157 | 50.81 | MASVSPAPNSSPSPTSPSTQSPPPPVVSTPPSNSPPPSPPQHPSTPPRQSPPPNSSDPTTPTPSPPGPPATSPPPASGTPPPLTPALSPPPPRTVPPATPPPTPSNPPPPSTPDPPSPSATPPVTFTPPPTPSNPPPNPSPPPAAEPPKTPPPQSSNPPENSPPPPPSPQANPPDNSPPPPQPTNPPENSPPPETSPPPPASIPPRNAPPPPRLAPPPGDPSPSSPPPKSLPPSSIAPPPPSHFPPPLPSKTPTLPSGNRTDDGSAPNVGVDPNSNSNGGISTGGAIAIGVVAGIVALSIVGFVLWYIRKPRRRDSGRGGFIMPSSLGSSPKSESSLMKVHSTPHQDRQASGSGSGASKDLGGLGNSRALFTYEELFRATNAFSAQNLLGEGGFGSVYKGCLPDGREVAVKELKVGGSQGEQEFKAEVEIIGRVHHRHLVSLVGYCILEHQRLLVYDYVPNNSLYYHLHLKGEGEPVLDWEKRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDAQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDASQPMGDESLVEWARPLLNHALDSQDFERLVDPRLERKYVESEVLRMIGIAAACVRHASAKRPQMGQVVRTFDSLATVDLSNGMRFGESRAFDSAQQSAEIRFFQMLAFGNQDYSSDFYSQGSSNADRRGDL | 718 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 21439862 | 21444647 | - | MC09g1573 | Mch9g2017 | 698899 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g2017 | 718 | Gene3D | Transferase(Phosphotransferase) domain 1 | 459 | 672 | - | - | |
Mch9g2017 | 718 | CDD | STKc_IRAK | 389 | 661 | - | - | |
Mch9g2017 | 718 | ProSitePatterns | Protein kinases ATP-binding region signature. | 389 | 411 | IPR017441 | GO:0005524(InterPro) | |
Mch9g2017 | 718 | MobiDBLite | consensus disorder prediction | 1 | 277 | - | - | |
Mch9g2017 | 718 | SUPERFAMILY | Protein kinase-like (PK-like) | 367 | 657 | IPR011009 | - | |
Mch9g2017 | 718 | MobiDBLite | consensus disorder prediction | 326 | 356 | - | - | |
Mch9g2017 | 718 | FunFam | proline-rich receptor-like protein kinase PERK8 | 459 | 672 | - | - | |
Mch9g2017 | 718 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 266 | 686 | IPR047117 | - | |
Mch9g2017 | 718 | SMART | serkin_6 | 383 | 626 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g2017 | 718 | Pfam | Protein kinase domain | 385 | 592 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g2017 | 718 | MobiDBLite | consensus disorder prediction | 10 | 253 | - | - | |
Mch9g2017 | 718 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 356 | 458 | - | - | |
Mch9g2017 | 718 | PRINTS | Proline rich extensin signature | 19 | 40 | - | - | |
Mch9g2017 | 718 | PRINTS | Proline rich extensin signature | 5 | 17 | - | - | |
Mch9g2017 | 718 | PRINTS | Proline rich extensin signature | 40 | 56 | - | - | |
Mch9g2017 | 718 | PRINTS | Proline rich extensin signature | 57 | 74 | - | - | |
Mch9g2017 | 718 | MobiDBLite | consensus disorder prediction | 317 | 360 | - | - | |
Mch9g2017 | 718 | ProSiteProfiles | Protein kinase domain profile. | 383 | 661 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g2017 | 718 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 505 | 517 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g2017 | 718 | Gene3D | Phosphorylase Kinase; domain 1 | 353 | 458 | - | - | |
Mch9g2017 | 718 | MobiDBLite | consensus disorder prediction | 254 | 277 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g1898 | Mch-Chr1:18923657 | Mch9g2017 | Mch-Chr9:21439862 | 8.49E-48 | dispersed | |
Mch2g0215 | Mch-Chr2:1636943 | Mch9g2017 | Mch-Chr9:21439862 | 8.81E-34 | dispersed | |
Mch4g1606 | Mch-Chr4:19285858 | Mch9g2017 | Mch-Chr9:21439862 | 2.93E-64 | dispersed | |
Mch6g2725 | Mch-Chr6:28863433 | Mch9g2017 | Mch-Chr9:21439862 | 4.31E-50 | dispersed | |
Mch8g1108 | Mch-Chr8:7826337 | Mch9g2017 | Mch-Chr9:21439862 | 1.54E-87 | dispersed | |
Mch8g2131 | Mch-Chr8:24431334 | Mch9g2017 | Mch-Chr9:21439862 | 8.14E-97 | dispersed | |
Mch8g2398 | Mch-Chr8:27056801 | Mch9g2017 | Mch-Chr9:21439862 | 5.09E-62 | dispersed | |
Mch9g0491 | Mch-Chr9:3621434 | Mch9g2017 | Mch-Chr9:21439862 | 9.05E-76 | dispersed | |
Mch9g2017 | Mch-Chr9:21439862 | Mch9g2244 | Mch-Chr9:22849797 | 2.29E-157 | dispersed | |
Mch4g1610 | Mch-Chr4:19309008 | Mch9g2017 | Mch-Chr9:21439862 | 6.45E-56 | transposed | |
Mch9g1468 | Mch-Chr9:17112653 | Mch9g2017 | Mch-Chr9:21439862 | 3.89E-63 | transposed | |
Mch4g2421 | Mch-Chr4:25193825 | Mch9g2017 | Mch-Chr9:21439862 | 5.38E-179 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77715 | PF00069 | Pkinase | 7.50E-44 | CL0016 | Mch | PK |
Pathway information
