Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2030 ATGGCAATCTCAAATCTCTCTCACAGTCACAGCTTGGTTCATGGACTGATGATGCTTTGTATTTTTTTCGTTCTATGCCACTGCTTGGTTGCGACAGGTGACCCCCCATTGACGTTGGATTACTATGCCAAAACTTGTCCCAATGTGTTGCAGGTTGTGAGGAAAGAGATAGAATGTGCAGTGCTTTCTGACCCACGTAATGCTGCTTTTCTTGTCCGCTTGCACTTCCACGACTGCTTCGTCCAGGGATGCGATGGGTCGGTTCTACTGGACGACACAATAACATTACAGGGAGAGAAAGAAGCTCCCACCAACAAACACTCCCTCCAAGGCTTCACAATCATTGACAGGATAAAGAATTACCTTGAATCAGAATGTCCTCGGATTGTTTCTTGTGCAGATATACTCACTATTGCAGCTAGGGATGCAGTGATTCTGGTGGGCGGACCTTATTGGGATGTTCCTCTGGGAAGAAAGGATTCCACAACTGCGAGTTATGAACTTGCAGAAACAAATCTTCCCACCGCCAATGAGGGGCTTCTCAGCATCATCTCCAAATTTCTTTATCAGGGTTTCTCTGTCACTGACATGGTAGCGCTATCAGGAGCGCACACCATTGGAATGGCGAGGTGTGAGAATTTCAGGGCAAGGATTTATGGGGATTTTGCAGCAACTTCTAATGCTTACAATCCAATTTCCAAGCCATATCTTGAGAAGTTGAGGTCTGTTTGCCCCCCAGTTGGGAAAGCTGCAGATAATAACATAACAGCAATGGACAACGTGACACCAGAGCTCTTTGACAACTCCTATTTCCACATCTTGATGAGAGGAGAAGGGATTTTGAATTCAGACCAGGAATTGTATTCCAGCCTTCTGGGAATTGAAACCAGGAATCTGGTGAAGAAATATGCTGCAGACCCACTTGCTTTCTTCCAGCAATTCTCTGATTCCATGGTGAAGTTGGGAAATATCACCAATTCTGATAGCTTTTTCACTGGGGAAGTCAGGAAAAACTGCAGGTTTATCAACACCTAG 1035 45.22 MAISNLSHSHSLVHGLMMLCIFFVLCHCLVATGDPPLTLDYYAKTCPNVLQVVRKEIECAVLSDPRNAAFLVRLHFHDCFVQGCDGSVLLDDTITLQGEKEAPTNKHSLQGFTIIDRIKNYLESECPRIVSCADILTIAARDAVILVGGPYWDVPLGRKDSTTASYELAETNLPTANEGLLSIISKFLYQGFSVTDMVALSGAHTIGMARCENFRARIYGDFAATSNAYNPISKPYLEKLRSVCPPVGKAADNNITAMDNVTPELFDNSYFHILMRGEGILNSDQELYSSLLGIETRNLVKKYAADPLAFFQQFSDSMVKLGNITNSDSFFTGEVRKNCRFINT 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21534314 21537941 - MC09g1580 Mch9g2030 698912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2030 344 FunFam Peroxidase 174 321 - -
Mch9g2030 344 CDD secretory_peroxidase 37 342 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch9g2030 344 Gene3D - 40 343 - -
Mch9g2030 344 FunFam Peroxidase 40 180 - -
Mch9g2030 344 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 ProSiteProfiles Plant heme peroxidase family profile. 36 343 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 Gene3D Peroxidase, domain 2 174 321 - -
Mch9g2030 344 Pfam Peroxidase 53 306 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 SUPERFAMILY Heme-dependent peroxidases 37 343 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 PANTHER PEROXIDASE 72-RELATED 21 342 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g2030 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Mch9g2030 344 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2145 Mch-Chr6:23836053 Mch9g2030 Mch-Chr9:21534314 6.86E-98 dispersed
Mch7g1248 Mch-Chr7:15998632 Mch9g2030 Mch-Chr9:21534314 3.35E-79 dispersed
Mch8g0870 Mch-Chr8:6209238 Mch9g2030 Mch-Chr9:21534314 8.50E-70 dispersed
Mch9g2030 Mch-Chr9:21534314 Mch9g2277 Mch-Chr9:23025538 1.77E-56 dispersed
Mch9g2030 Mch-Chr9:21534314 Mch1g1543 Mch-Chr1:16768075 5.79E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2030 K00430 - csv:101216779 558.91