Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g2066 | ATGGATCACGCCTCCTACCGCAGTCGCAGAACCACCACCAAATCTGGGCTCTATTCCACAGTTGTCATCCATTCCAATTCTGATTCCGACTCCGACAAGAATCCCGACGATCGGAACCTTCAGCAGCGACGGAGGCCGCCGGCCAAAGACCAAGACCTATACGCTACAATGGTATACAAGGACGTTGATAAGGGCCGGGAGGACGAGGAGGATGACGATTCCTCTCTCCCTCCTCTCCTTAAACGTCTTCCTAAGGATTTCGGTGGCGGAGCCCCAATTGACTACGAGGACGACAGTGCTTTTGATTTTGATGATGATACTGAAGACTTTGGTACTATGATCGTTAAGACGGATAGAAATCGTCCTCGAGACCGCTCTGCGTCGTCTTCGGTTTCAACGAGGCCTCGAGCCTCGCAGTTACCGTTCGTGAATTTTCAGCCGGGGAGCCCTGGGAAGAGAGCAGGTGGTGATGGTGTTAGTGAACAAGGCGACGAGAGCGAGGAAGGTGATGGTGATGGATATTCGACGTTTGTGGTGAGGCCCACGGCGAGGTCGCGGAACAGAGAATCTATTAGTGGGACTGTTGTTCGAAGGACCGTTGGTAGTCGTATTGATACCAGAGATGGGGGCGGAGGACTTGAGGGGTCCACGATGGGAAGAGCGGTGGCGAGTATGCAAGGAATGGGAGAGTTAGGGTTTGGGAAGCCGAGGAAGGGGAATGGATCGCCGAGGAGTGAGGAGGGCGGTGGCCGGCTGCGGAGTAAGGAGGTATCCTCGAGTTCGATTCCTGAAAGCATTACCAGGGAAGATCCAAATTCTAAGTATGAATTGCTCAACGAACTTGGAAAGGGATCTTATGGGGCTGTATATAAAGCCAGGGATATTAAAACCTCTGAGCTGGTTGCTATCAAGGTCATATCTTTGTCTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATTGAGATGTTGCAGCAATGCAGCCATCCAAATGTTGTCCGCTATCTTGGGAGCTATCAAGGAGAGGAGTATCTCTGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAACGTTACTGAGGAACCTTTAGAGGAATATCAAATAGCATATATCTGCAGGGAGGCATTGAAGGGCCTTACTTATCTTCACACAATATTCAAAGTTCATAGAGATATCAAGGGCGGTAATATATTGTTAACCGAGCAAGGTGATGTCAAGTTGGGAGACTTTGGAGTTGCAGCACAGCTTACTAGGACCATGTCAAAGCGCAATACATTCATCGGTACTCCACATTGGATGGCTCCGGAGGTTATTCAGGAAAGTCGATATGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGCCTTCCTCCAAGATCAGCAGTGCATCCAATGAGGGTTTTATTCATGATATCTATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGGTGTTCCATGATTTTGTTGCAAAATGTCTGACAAAGGATCCCCGTTCACGACCTGCTGCTTCTGAGATGTTGAAGCACAAATTCATTGAGAAATGCAGATGCGGGGCATCAGCAATGTTGCCCAAGATTGAAAAGGCTAGGAAAATCAGGACTTTAATGGCTCAGCAAGCACATACTATTGCTCCAGATGCATCAGGAGATGGTACAATAGTAGCTGCAAAGTTGAATCAAGATTATGGCGATACTGTTCCTTCAAAGCCTCAGAATATTGGAATACCGGTGGGAAACGAAATTCCAGCTGGTGGCACTTTGAGGAAGCAAGAGCTCTCAGGTGTGGGACTTGTAGCGGAAGGTACTTTTGGCACTGTAATAGTCCATGATGGAGACGAGAATGATAAGGTGGTTTCCCAACTGAATATTGGCAATGCTGAACCACCAACTACTTCTATACGTGACGAGAACTTATCCGTTGGTGGAGTCAAATTTGTTGGCTCTAGTGTGGATCATACGGGAGGTATTGTAAGTAATATTCTTGATGGAAAATCGGATCCCACCATGCATGCATCTTCACCGTCATTTTTGGATATTCATAGCACATTGAAGAGTGAAACTGTCAGCCGGAAATCTTTTGCTCTGCAGGACAAGCTTTGGTCCATTTATGCAGCGGGTAATACCGTACCCATTCCGTTCTTGAGGGCTACTGATATATCCCCTATTGCTTTGTTATCGGACAATGTCCTTGGAGGCATGCAGCAACAATATAATAGGGGAACTGTAGAGGTGGAGACAATTCAGGAACTTTTCACTGGCGATGGACAATCAAGAAAGGGTCGTAGGGGACAAAATGAGATGCCCCTTCCTCCCAGTGTTTATCAAAGACTTACTTCAAGTCCCACACTGTTGAACCTTGCCCAGGCTTTAGCTTACCACAGAATGTGTTACGAAGATATGCCGCTCCAGGAGTTGCAGGCGACACAAGAACAACAAACCATTCAAAATCTTTGCGATACACTTAGAACTATCCTCCGATTGTAG | 2535 | 47.34 | MDHASYRSRRTTTKSGLYSTVVIHSNSDSDSDKNPDDRNLQQRRRPPAKDQDLYATMVYKDVDKGREDEEDDDSSLPPLLKRLPKDFGGGAPIDYEDDSAFDFDDDTEDFGTMIVKTDRNRPRDRSASSSVSTRPRASQLPFVNFQPGSPGKRAGGDGVSEQGDESEEGDGDGYSTFVVRPTARSRNRESISGTVVRRTVGSRIDTRDGGGGLEGSTMGRAVASMQGMGELGFGKPRKGNGSPRSEEGGGRLRSKEVSSSSIPESITREDPNSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLTYLHTIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKDPRSRPAASEMLKHKFIEKCRCGASAMLPKIEKARKIRTLMAQQAHTIAPDASGDGTIVAAKLNQDYGDTVPSKPQNIGIPVGNEIPAGGTLRKQELSGVGLVAEGTFGTVIVHDGDENDKVVSQLNIGNAEPPTTSIRDENLSVGGVKFVGSSVDHTGGIVSNILDGKSDPTMHASSPSFLDIHSTLKSETVSRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQQYNRGTVEVETIQELFTGDGQSRKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTIQNLCDTLRTILRL | 844 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 21755076 | 21771727 | - | MC09g1609 | Mch9g2066 | 698948 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g2066 | 844 | MobiDBLite | consensus disorder prediction | 180 | 196 | - | - | |
Mch9g2066 | 844 | MobiDBLite | consensus disorder prediction | 29 | 65 | - | - | |
Mch9g2066 | 844 | CDD | STKc_MAP4K3_like | 274 | 529 | - | - | |
Mch9g2066 | 844 | MobiDBLite | consensus disorder prediction | 10 | 28 | - | - | |
Mch9g2066 | 844 | FunFam | serine/threonine-protein kinase dst1 isoform X1 | 272 | 562 | - | - | |
Mch9g2066 | 844 | MobiDBLite | consensus disorder prediction | 126 | 145 | - | - | |
Mch9g2066 | 844 | MobiDBLite | consensus disorder prediction | 254 | 268 | - | - | |
Mch9g2066 | 844 | SUPERFAMILY | Protein kinase-like (PK-like) | 272 | 530 | IPR011009 | - | |
Mch9g2066 | 844 | MobiDBLite | consensus disorder prediction | 1 | 196 | - | - | |
Mch9g2066 | 844 | Gene3D | Transferase(Phosphotransferase) domain 1 | 271 | 564 | - | - | |
Mch9g2066 | 844 | FunFam | Aurora kinase A | 267 | 356 | - | - | |
Mch9g2066 | 844 | ProSiteProfiles | Protein kinase domain profile. | 275 | 529 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g2066 | 844 | MobiDBLite | consensus disorder prediction | 229 | 271 | - | - | |
Mch9g2066 | 844 | Pfam | Protein kinase domain | 275 | 529 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g2066 | 844 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TAO | 250 | 562 | IPR050285 | GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER) | |
Mch9g2066 | 844 | SMART | serkin_6 | 275 | 529 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g2066 | 844 | MobiDBLite | consensus disorder prediction | 109 | 125 | - | - | |
Mch9g2066 | 844 | ProSitePatterns | Protein kinases ATP-binding region signature. | 281 | 304 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1051 | Mch-Chr11:7308079 | Mch9g2066 | Mch-Chr9:21755076 | 1.02E-74 | dispersed | |
Mch8g1508 | Mch-Chr8:11515694 | Mch9g2066 | Mch-Chr9:21755076 | 3.23E-55 | dispersed | |
Mch8g2928 | Mch-Chr8:32034639 | Mch9g2066 | Mch-Chr9:21755076 | 2.42E-29 | dispersed | |
Mch9g0898 | Mch-Chr9:7043943 | Mch9g2066 | Mch-Chr9:21755076 | 8.35E-30 | dispersed | |
Mch9g2066 | Mch-Chr9:21755076 | Mch1g1930 | Mch-Chr1:19151726 | 3.65E-26 | dispersed | |
Mch9g2066 | Mch-Chr9:21755076 | Mch4g2219 | Mch-Chr4:23817061 | 1.31E-56 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77717 | PF00069 | Pkinase | 4.90E-68 | CL0016 | Mch | PK |
Pathway information
