Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2066 ATGGATCACGCCTCCTACCGCAGTCGCAGAACCACCACCAAATCTGGGCTCTATTCCACAGTTGTCATCCATTCCAATTCTGATTCCGACTCCGACAAGAATCCCGACGATCGGAACCTTCAGCAGCGACGGAGGCCGCCGGCCAAAGACCAAGACCTATACGCTACAATGGTATACAAGGACGTTGATAAGGGCCGGGAGGACGAGGAGGATGACGATTCCTCTCTCCCTCCTCTCCTTAAACGTCTTCCTAAGGATTTCGGTGGCGGAGCCCCAATTGACTACGAGGACGACAGTGCTTTTGATTTTGATGATGATACTGAAGACTTTGGTACTATGATCGTTAAGACGGATAGAAATCGTCCTCGAGACCGCTCTGCGTCGTCTTCGGTTTCAACGAGGCCTCGAGCCTCGCAGTTACCGTTCGTGAATTTTCAGCCGGGGAGCCCTGGGAAGAGAGCAGGTGGTGATGGTGTTAGTGAACAAGGCGACGAGAGCGAGGAAGGTGATGGTGATGGATATTCGACGTTTGTGGTGAGGCCCACGGCGAGGTCGCGGAACAGAGAATCTATTAGTGGGACTGTTGTTCGAAGGACCGTTGGTAGTCGTATTGATACCAGAGATGGGGGCGGAGGACTTGAGGGGTCCACGATGGGAAGAGCGGTGGCGAGTATGCAAGGAATGGGAGAGTTAGGGTTTGGGAAGCCGAGGAAGGGGAATGGATCGCCGAGGAGTGAGGAGGGCGGTGGCCGGCTGCGGAGTAAGGAGGTATCCTCGAGTTCGATTCCTGAAAGCATTACCAGGGAAGATCCAAATTCTAAGTATGAATTGCTCAACGAACTTGGAAAGGGATCTTATGGGGCTGTATATAAAGCCAGGGATATTAAAACCTCTGAGCTGGTTGCTATCAAGGTCATATCTTTGTCTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATTGAGATGTTGCAGCAATGCAGCCATCCAAATGTTGTCCGCTATCTTGGGAGCTATCAAGGAGAGGAGTATCTCTGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAACGTTACTGAGGAACCTTTAGAGGAATATCAAATAGCATATATCTGCAGGGAGGCATTGAAGGGCCTTACTTATCTTCACACAATATTCAAAGTTCATAGAGATATCAAGGGCGGTAATATATTGTTAACCGAGCAAGGTGATGTCAAGTTGGGAGACTTTGGAGTTGCAGCACAGCTTACTAGGACCATGTCAAAGCGCAATACATTCATCGGTACTCCACATTGGATGGCTCCGGAGGTTATTCAGGAAAGTCGATATGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGCCTTCCTCCAAGATCAGCAGTGCATCCAATGAGGGTTTTATTCATGATATCTATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGGTGTTCCATGATTTTGTTGCAAAATGTCTGACAAAGGATCCCCGTTCACGACCTGCTGCTTCTGAGATGTTGAAGCACAAATTCATTGAGAAATGCAGATGCGGGGCATCAGCAATGTTGCCCAAGATTGAAAAGGCTAGGAAAATCAGGACTTTAATGGCTCAGCAAGCACATACTATTGCTCCAGATGCATCAGGAGATGGTACAATAGTAGCTGCAAAGTTGAATCAAGATTATGGCGATACTGTTCCTTCAAAGCCTCAGAATATTGGAATACCGGTGGGAAACGAAATTCCAGCTGGTGGCACTTTGAGGAAGCAAGAGCTCTCAGGTGTGGGACTTGTAGCGGAAGGTACTTTTGGCACTGTAATAGTCCATGATGGAGACGAGAATGATAAGGTGGTTTCCCAACTGAATATTGGCAATGCTGAACCACCAACTACTTCTATACGTGACGAGAACTTATCCGTTGGTGGAGTCAAATTTGTTGGCTCTAGTGTGGATCATACGGGAGGTATTGTAAGTAATATTCTTGATGGAAAATCGGATCCCACCATGCATGCATCTTCACCGTCATTTTTGGATATTCATAGCACATTGAAGAGTGAAACTGTCAGCCGGAAATCTTTTGCTCTGCAGGACAAGCTTTGGTCCATTTATGCAGCGGGTAATACCGTACCCATTCCGTTCTTGAGGGCTACTGATATATCCCCTATTGCTTTGTTATCGGACAATGTCCTTGGAGGCATGCAGCAACAATATAATAGGGGAACTGTAGAGGTGGAGACAATTCAGGAACTTTTCACTGGCGATGGACAATCAAGAAAGGGTCGTAGGGGACAAAATGAGATGCCCCTTCCTCCCAGTGTTTATCAAAGACTTACTTCAAGTCCCACACTGTTGAACCTTGCCCAGGCTTTAGCTTACCACAGAATGTGTTACGAAGATATGCCGCTCCAGGAGTTGCAGGCGACACAAGAACAACAAACCATTCAAAATCTTTGCGATACACTTAGAACTATCCTCCGATTGTAG 2535 47.34 MDHASYRSRRTTTKSGLYSTVVIHSNSDSDSDKNPDDRNLQQRRRPPAKDQDLYATMVYKDVDKGREDEEDDDSSLPPLLKRLPKDFGGGAPIDYEDDSAFDFDDDTEDFGTMIVKTDRNRPRDRSASSSVSTRPRASQLPFVNFQPGSPGKRAGGDGVSEQGDESEEGDGDGYSTFVVRPTARSRNRESISGTVVRRTVGSRIDTRDGGGGLEGSTMGRAVASMQGMGELGFGKPRKGNGSPRSEEGGGRLRSKEVSSSSIPESITREDPNSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLTYLHTIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKDPRSRPAASEMLKHKFIEKCRCGASAMLPKIEKARKIRTLMAQQAHTIAPDASGDGTIVAAKLNQDYGDTVPSKPQNIGIPVGNEIPAGGTLRKQELSGVGLVAEGTFGTVIVHDGDENDKVVSQLNIGNAEPPTTSIRDENLSVGGVKFVGSSVDHTGGIVSNILDGKSDPTMHASSPSFLDIHSTLKSETVSRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQQYNRGTVEVETIQELFTGDGQSRKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTIQNLCDTLRTILRL 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21755076 21771727 - MC09g1609 Mch9g2066 698948

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2066 844 MobiDBLite consensus disorder prediction 180 196 - -
Mch9g2066 844 MobiDBLite consensus disorder prediction 29 65 - -
Mch9g2066 844 CDD STKc_MAP4K3_like 274 529 - -
Mch9g2066 844 MobiDBLite consensus disorder prediction 10 28 - -
Mch9g2066 844 FunFam serine/threonine-protein kinase dst1 isoform X1 272 562 - -
Mch9g2066 844 MobiDBLite consensus disorder prediction 126 145 - -
Mch9g2066 844 MobiDBLite consensus disorder prediction 254 268 - -
Mch9g2066 844 SUPERFAMILY Protein kinase-like (PK-like) 272 530 IPR011009 -
Mch9g2066 844 MobiDBLite consensus disorder prediction 1 196 - -
Mch9g2066 844 Gene3D Transferase(Phosphotransferase) domain 1 271 564 - -
Mch9g2066 844 FunFam Aurora kinase A 267 356 - -
Mch9g2066 844 ProSiteProfiles Protein kinase domain profile. 275 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2066 844 MobiDBLite consensus disorder prediction 229 271 - -
Mch9g2066 844 Pfam Protein kinase domain 275 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2066 844 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 250 562 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Mch9g2066 844 SMART serkin_6 275 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2066 844 MobiDBLite consensus disorder prediction 109 125 - -
Mch9g2066 844 ProSitePatterns Protein kinases ATP-binding region signature. 281 304 IPR017441 GO:0005524(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2066 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1051 Mch-Chr11:7308079 Mch9g2066 Mch-Chr9:21755076 1.02E-74 dispersed
Mch8g1508 Mch-Chr8:11515694 Mch9g2066 Mch-Chr9:21755076 3.23E-55 dispersed
Mch8g2928 Mch-Chr8:32034639 Mch9g2066 Mch-Chr9:21755076 2.42E-29 dispersed
Mch9g0898 Mch-Chr9:7043943 Mch9g2066 Mch-Chr9:21755076 8.35E-30 dispersed
Mch9g2066 Mch-Chr9:21755076 Mch1g1930 Mch-Chr1:19151726 3.65E-26 dispersed
Mch9g2066 Mch-Chr9:21755076 Mch4g2219 Mch-Chr4:23817061 1.31E-56 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch11g1051 . 1 686 MAP Kinase Kinase Kinase Kinase AT1G53165 62.2 6.8e-216 747.3
Mch11g1051 . 1 686 MAP Kinase Kinase Kinase Kinase AT3G15220 63.0 1.7e-222 769.2
Mch9g2066 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 51.3 4.3e-69 259.6
Mch9g2066 . 1 845 MAP Kinase Kinase Kinase Kinase AT1G69220 57.6 7.7e-243 837.0
Mch11g1051 . 23 267 MAP Kinase Kinase Kinase Kinase AT1G69220 52.0 6.2e-67 252.7
Mch4g2219 . 1 659 MAP Kinase Kinase Kinase Kinase AT5G14720 67.1 7.6e-252 866.7
Mch8g1508 . 24 630 MAP Kinase Kinase Kinase Kinase AT5G14720 55.1 7.2e-194 674.1
Mch10g1743 . 9 726 MAP Kinase Kinase Kinase Kinase AT4G24100 63.6 1.3e-241 832.8
Mch10g1743 . 11 727 MAP Kinase Kinase Kinase Kinase AT4G10730 63.9 6.0e-244 840.5
Mch8g1055 . 4 494 MAP Kinase Kinase Kinase Kinase AT1G70430 51.9 3.7e-133 472.2
Mch10g1743 . 5 353 MAP Kinase Kinase Kinase Kinase AT1G70430 59.0 9.8e-118 421.0
Mch8g1055 . 1 696 MAP Kinase Kinase Kinase Kinase AT1G79640 59.1 6.2e-214 740.7
Mch8g1508 . 30 377 MAP Kinase Kinase Kinase Kinase AT1G79640 67.8 1.5e-143 506.9
Mch4g2219 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.8 1.7e-104 376.7
Mch8g1508 . 24 350 MAP Kinase Kinase Kinase Kinase AT1G23700 56.1 1.3e-96 350.5
Mch8g1055 . 6 324 MAP Kinase Kinase Kinase Kinase AT1G23700 52.5 1.0e-88 324.3
Mch10g1743 . 15 306 MAP Kinase Kinase Kinase Kinase AT1G23700 50.8 6.3e-75 278.5
Mch5g0066 . 19 500 MAP Kinase Kinase Kinase Kinase AT4G14480 55.5 3.9e-141 498.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003387 1 1 1 1 1 2 1 2 3 0 3 2 1 1 1 1 3 2 1 3 1 3 1 1 1 2 1 1 4 1 47
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77717 PF00069 Pkinase 4.90E-68 CL0016 Mch PK