Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2066 ATGGATCACGCCTCCTACCGCAGTCGCAGAACCACCACCAAATCTGGGCTCTATTCCACAGTTGTCATCCATTCCAATTCTGATTCCGACTCCGACAAGAATCCCGACGATCGGAACCTTCAGCAGCGACGGAGGCCGCCGGCCAAAGACCAAGACCTATACGCTACAATGGTATACAAGGACGTTGATAAGGGCCGGGAGGACGAGGAGGATGACGATTCCTCTCTCCCTCCTCTCCTTAAACGTCTTCCTAAGGATTTCGGTGGCGGAGCCCCAATTGACTACGAGGACGACAGTGCTTTTGATTTTGATGATGATACTGAAGACTTTGGTACTATGATCGTTAAGACGGATAGAAATCGTCCTCGAGACCGCTCTGCGTCGTCTTCGGTTTCAACGAGGCCTCGAGCCTCGCAGTTACCGTTCGTGAATTTTCAGCCGGGGAGCCCTGGGAAGAGAGCAGGTGGTGATGGTGTTAGTGAACAAGGCGACGAGAGCGAGGAAGGTGATGGTGATGGATATTCGACGTTTGTGGTGAGGCCCACGGCGAGGTCGCGGAACAGAGAATCTATTAGTGGGACTGTTGTTCGAAGGACCGTTGGTAGTCGTATTGATACCAGAGATGGGGGCGGAGGACTTGAGGGGTCCACGATGGGAAGAGCGGTGGCGAGTATGCAAGGAATGGGAGAGTTAGGGTTTGGGAAGCCGAGGAAGGGGAATGGATCGCCGAGGAGTGAGGAGGGCGGTGGCCGGCTGCGGAGTAAGGAGGTATCCTCGAGTTCGATTCCTGAAAGCATTACCAGGGAAGATCCAAATTCTAAGTATGAATTGCTCAACGAACTTGGAAAGGGATCTTATGGGGCTGTATATAAAGCCAGGGATATTAAAACCTCTGAGCTGGTTGCTATCAAGGTCATATCTTTGTCTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATTGAGATGTTGCAGCAATGCAGCCATCCAAATGTTGTCCGCTATCTTGGGAGCTATCAAGGAGAGGAGTATCTCTGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAACGTTACTGAGGAACCTTTAGAGGAATATCAAATAGCATATATCTGCAGGGAGGCATTGAAGGGCCTTACTTATCTTCACACAATATTCAAAGTTCATAGAGATATCAAGGGCGGTAATATATTGTTAACCGAGCAAGGTGATGTCAAGTTGGGAGACTTTGGAGTTGCAGCACAGCTTACTAGGACCATGTCAAAGCGCAATACATTCATCGGTACTCCACATTGGATGGCTCCGGAGGTTATTCAGGAAAGTCGATATGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGCCTTCCTCCAAGATCAGCAGTGCATCCAATGAGGGTTTTATTCATGATATCTATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGGTGTTCCATGATTTTGTTGCAAAATGTCTGACAAAGGATCCCCGTTCACGACCTGCTGCTTCTGAGATGTTGAAGCACAAATTCATTGAGAAATGCAGATGCGGGGCATCAGCAATGTTGCCCAAGATTGAAAAGGCTAGGAAAATCAGGACTTTAATGGCTCAGCAAGCACATACTATTGCTCCAGATGCATCAGGAGATGGTACAATAGTAGCTGCAAAGTTGAATCAAGATTATGGCGATACTGTTCCTTCAAAGCCTCAGAATATTGGAATACCGGTGGGAAACGAAATTCCAGCTGGTGGCACTTTGAGGAAGCAAGAGCTCTCAGGTGTGGGACTTGTAGCGGAAGGTACTTTTGGCACTGTAATAGTCCATGATGGAGACGAGAATGATAAGGTGGTTTCCCAACTGAATATTGGCAATGCTGAACCACCAACTACTTCTATACGTGACGAGAACTTATCCGTTGGTGGAGTCAAATTTGTTGGCTCTAGTGTGGATCATACGGGAGGTATTGTAAGTAATATTCTTGATGGAAAATCGGATCCCACCATGCATGCATCTTCACCGTCATTTTTGGATATTCATAGCACATTGAAGAGTGAAACTGTCAGCCGGAAATCTTTTGCTCTGCAGGACAAGCTTTGGTCCATTTATGCAGCGGGTAATACCGTACCCATTCCGTTCTTGAGGGCTACTGATATATCCCCTATTGCTTTGTTATCGGACAATGTCCTTGGAGGCATGCAGCAACAATATAATAGGGGAACTGTAGAGGTGGAGACAATTCAGGAACTTTTCACTGGCGATGGACAATCAAGAAAGGGTCGTAGGGGACAAAATGAGATGCCCCTTCCTCCCAGTGTTTATCAAAGACTTACTTCAAGTCCCACACTGTTGAACCTTGCCCAGGCTTTAGCTTACCACAGAATGTGTTACGAAGATATGCCGCTCCAGGAGTTGCAGGCGACACAAGAACAACAAACCATTCAAAATCTTTGCGATACACTTAGAACTATCCTCCGATTGTAG 2535 47.34 MDHASYRSRRTTTKSGLYSTVVIHSNSDSDSDKNPDDRNLQQRRRPPAKDQDLYATMVYKDVDKGREDEEDDDSSLPPLLKRLPKDFGGGAPIDYEDDSAFDFDDDTEDFGTMIVKTDRNRPRDRSASSSVSTRPRASQLPFVNFQPGSPGKRAGGDGVSEQGDESEEGDGDGYSTFVVRPTARSRNRESISGTVVRRTVGSRIDTRDGGGGLEGSTMGRAVASMQGMGELGFGKPRKGNGSPRSEEGGGRLRSKEVSSSSIPESITREDPNSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLTYLHTIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFVAKCLTKDPRSRPAASEMLKHKFIEKCRCGASAMLPKIEKARKIRTLMAQQAHTIAPDASGDGTIVAAKLNQDYGDTVPSKPQNIGIPVGNEIPAGGTLRKQELSGVGLVAEGTFGTVIVHDGDENDKVVSQLNIGNAEPPTTSIRDENLSVGGVKFVGSSVDHTGGIVSNILDGKSDPTMHASSPSFLDIHSTLKSETVSRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQQYNRGTVEVETIQELFTGDGQSRKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTIQNLCDTLRTILRL 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21755076 21771727 - MC09g1609 Mch9g2066 698948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2066 844 MobiDBLite consensus disorder prediction 180 196 - -
Mch9g2066 844 MobiDBLite consensus disorder prediction 29 65 - -
Mch9g2066 844 CDD STKc_MAP4K3_like 274 529 - -
Mch9g2066 844 MobiDBLite consensus disorder prediction 10 28 - -
Mch9g2066 844 FunFam serine/threonine-protein kinase dst1 isoform X1 272 562 - -
Mch9g2066 844 MobiDBLite consensus disorder prediction 126 145 - -
Mch9g2066 844 MobiDBLite consensus disorder prediction 254 268 - -
Mch9g2066 844 SUPERFAMILY Protein kinase-like (PK-like) 272 530 IPR011009 -
Mch9g2066 844 MobiDBLite consensus disorder prediction 1 196 - -
Mch9g2066 844 Gene3D Transferase(Phosphotransferase) domain 1 271 564 - -
Mch9g2066 844 FunFam Aurora kinase A 267 356 - -
Mch9g2066 844 ProSiteProfiles Protein kinase domain profile. 275 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2066 844 MobiDBLite consensus disorder prediction 229 271 - -
Mch9g2066 844 Pfam Protein kinase domain 275 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2066 844 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 250 562 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Mch9g2066 844 SMART serkin_6 275 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2066 844 MobiDBLite consensus disorder prediction 109 125 - -
Mch9g2066 844 ProSitePatterns Protein kinases ATP-binding region signature. 281 304 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1051 Mch-Chr11:7308079 Mch9g2066 Mch-Chr9:21755076 1.02E-74 dispersed
Mch8g1508 Mch-Chr8:11515694 Mch9g2066 Mch-Chr9:21755076 3.23E-55 dispersed
Mch8g2928 Mch-Chr8:32034639 Mch9g2066 Mch-Chr9:21755076 2.42E-29 dispersed
Mch9g0898 Mch-Chr9:7043943 Mch9g2066 Mch-Chr9:21755076 8.35E-30 dispersed
Mch9g2066 Mch-Chr9:21755076 Mch1g1930 Mch-Chr1:19151726 3.65E-26 dispersed
Mch9g2066 Mch-Chr9:21755076 Mch4g2219 Mch-Chr4:23817061 1.31E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77717 PF00069 Pkinase 4.90E-68 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2066 - - - 0.0