Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2077 ATGGCTTTGATGACGAACGTGATTCACTCTCCAATCTGTACCCATCGGTTGTCTTCCCTTCGCGTCCCCCCGAAAAGAACTTTTCCCGCCAATTTTGTCGCCCCCAAATCTCGATCACTTGCTTCTAAAGCTTTGAACTCGGCGGTTTCGCCGTCGGCAGAATTATCTGGCAGGGCTATCGGGTTCTTAAGCTGTCGACAACCGCTAAAGTCGCGAGGTGTTGTTCATCGACCGGTGGTGAGGGCCGCTGCAGCTGATGCTGACGGAACACGCGACGGGTTGACTAGCCCTTCGAAGAGCTTTGCTGCAAGATTTCCAGCACTCGTTACTGGTTTCTACTTCTTTATGTGGTACTTTTTAAATGTTATTTTCAACATACTCAACAAAAGGGTCTACAATTATTTCCCATATCCATATTTTGTCTCTGTCATACATCTTCTTGTTGGTGTTGGATATTGTCTCATTTCTTGGGCTGTTGGTCTGCCAAAACGTGCTCCAATGGATAAGGAGCTCTTGCTATTATTAACTCCAGTTTCGCTATGTCATGCTCTTGGACATGTGATGTCAAATGTATCATTTGCAGCTGTTGCTGTGTCCTTCACTCACACCATTAAAGCTCTGGAGCCATTCTTTAACGCTGCTGCTTCCCAATTTGTTTTGGGGCACCAAATTCCCATCAGCTTGTGGCTTTCTCTGGCACCTGTTGTTTTAGGTGTGTCAATGGCATCGCTAACGGAACTTTCCTTCAATTGGACTGGCTTTATTAGTGCAATGATTTCAAACATTGCCTTTACCTATAGAAGCATCTACTCCAAGAAGGCAATGACTGGAATGGACAGTACAAACGTGTATGCATACACCTCGATAATCGCTCTTTTGTTTTGCATCCCTCCTGCAGTAATGATTGAGGGACCACAGTTGCTGCAGCACGGCTTTAAGGATGCCATTGCCAAAGTGGGCCTACAAAAATTCCTGTCTGATCTTTTCTGGATTGGCATGTTTTATCATCTCTACAATCAGCTTGCTGCTAATACTCTGGAACGTGTTGCACCTCTAACTCATGCTGTAGGAAATGTATTGAAGCGAGTTTTTGTGATCGGGTTCTCTATTGTGGTTTTCGGCAATACGATTTCAACACAAACCGGAATCGGTACTGCTATAGCGATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAAACTTGGAGGAACAAAAACGGAGGGCTGCAAAAATTCCAGCATCATAG 1248 45.11 MALMTNVIHSPICTHRLSSLRVPPKRTFPANFVAPKSRSLASKALNSAVSPSAELSGRAIGFLSCRQPLKSRGVVHRPVVRAAAADADGTRDGLTSPSKSFAARFPALVTGFYFFMWYFLNVIFNILNKRVYNYFPYPYFVSVIHLLVGVGYCLISWAVGLPKRAPMDKELLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPISLWLSLAPVVLGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLAANTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNTISTQTGIGTAIAIAGVAIYSLIKANLEEQKRRAAKIPAS 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21833395 21837898 - MC09g1620 Mch9g2077 698959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2077 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 397 - -
Mch9g2077 415 PANTHER SOLUTE CARRIER FAMILY 35 104 397 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Mch9g2077 415 Pfam Triose-phosphate Transporter family 109 396 IPR004853 -
Mch9g2077 415 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 108 406 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1894 Mch-Chr1:18908375 Mch9g2077 Mch-Chr9:21833395 1.75E-187 dispersed
Mch5g0285 Mch-Chr5:1948274 Mch9g2077 Mch-Chr9:21833395 1.26E-72 dispersed
Mch9g2077 Mch-Chr9:21833395 Mch1g1770 Mch-Chr1:18083541 2.76E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2077 K15283 - csv:101221040 674.085