Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g2095 | ATTATGGGTGATGATGAAGAAGAACAGCCACCGAATTCGCCGCCGCCGAAGTCCAAGGCCGTTCTGTCGCGGCCCACTATTAATCTCCCGCCACGGACTTCTATGGAGTCGTTCTTCGGTGGGCCGGGTTTCGGATTCGGGTTTAGCCCAGGCCCCATGACGCTCGTCTCGAGCTTCTTCTCCGATTCCGACGACTGCAAGTCTTTCTCTCAGCTCCTTGCCGGAGCCATGGCCTCGCCGGTGGCAGTTCCTCCCCACGCTCCGACGGCGCTTGAGCTCAAGGGCTCAGCCGGTCTGGATTCTGCGGGACTATTTTCTCCCGGTCAGGGACCTTTTGGAATGACGCATCAGCAGGCTTTGGCACAGGTTACCATGCAGGCTGCACAAACCTATTCTCATAAGCAAATGGAAGCAGAATCTTTTTCTTCATCGGTAGCACCCGCTGCATCCGCAGAGCTTTCAGCGACATTTCCTGGCGAGAAAACTAAAGATCAGCTGATGCAACCTCCACTACTGAACTCTGCAGTTGCTACCACGGAGTCATTGGATATCTCTCAATCAGATCAGAGATTGCCACCTTCTTCGTGTAATGTCGATAGGCCTGCTAATGACGGCTACAATTGGAGAAAATATGGACAGAAACAAGTGAAGGGCAGTGAATTTCCTCGAAGCTATTATAAGTGCACACATCTGAATTGTCCTGTGAAGAAAAAGGTTGAACGATCTCTGGAAGGCCAGGTTACTGAAATTATCTACAAAGGTGAGCACAACCATGAACGACCTCAACTGAATAAGCGAGCGAAGGATGTCGGTAATTCTAACGGATATTCAAGTTTTCCTGGAAATCCTGAGCTATCTTCTCAACTTCAAAGTGGATATTTGAACAAATCGAATGAGCAGACAGCTGTGTCTTCTATTGCAAAGAAAGATCAGGATTCAAGCCTTGTTACACATGAACAGTTATCTGGTACTAGTGATGGTGAGGGATTGAGTGAGATAGAAACTGGAGTGAATCAAAAAGATGAAGACGAGCCCGATGCCAAGAGACGGAATACTGAGGTTAGAGTTTCAGAGCCAGCATCTTCCCATAGGACCCTCACGGAATCCAGAATCATTGTGCAGACCACAAGTGAAGTCGATCTATTGGATGATGGCTACAGGTGGCGGAAGTACGGGCAGAAAATTGTTAAAGGCAATCCTTACCCCAGGAGCTATTATAAATGCACGACTCCGGGATGCAATGTTCGTAAACATGTTGAGAGAGCTTCAACAGACCCAAAAGCTGTAGTAACAACGTACGAGGGTAAACACAATCACGATGTTCCAGCCGGTAGAACCACCAGCCACAGTACATTCAACAGCAACGTTCCTCACCTAAAATCACAAAGTATGGTTACTGAGAAAAGATTTTCAAGTAAGAACACTGATTCCGGGAACTCACGTCAACAGCCTGTTGGACTTCTACGGTTAAAGGAAGAACAAATAACATAG | 1491 | 47.62 | IMGDDEEEQPPNSPPPKSKAVLSRPTINLPPRTSMESFFGGPGFGFGFSPGPMTLVSSFFSDSDDCKSFSQLLAGAMASPVAVPPHAPTALELKGSAGLDSAGLFSPGQGPFGMTHQQALAQVTMQAAQTYSHKQMEAESFSSSVAPAASAELSATFPGEKTKDQLMQPPLLNSAVATTESLDISQSDQRLPPSSCNVDRPANDGYNWRKYGQKQVKGSEFPRSYYKCTHLNCPVKKKVERSLEGQVTEIIYKGEHNHERPQLNKRAKDVGNSNGYSSFPGNPELSSQLQSGYLNKSNEQTAVSSIAKKDQDSSLVTHEQLSGTSDGEGLSEIETGVNQKDEDEPDAKRRNTEVRVSEPASSHRTLTESRIIVQTTSEVDLLDDGYRWRKYGQKIVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVVTTYEGKHNHDVPAGRTTSHSTFNSNVPHLKSQSMVTEKRFSSKNTDSGNSRQQPVGLLRLKEEQIT | 496 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 21929943 | 21933268 | + | MC09g1638 | Mch9g2095 | 698977 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 444 | 484 | - | - | |
Mch9g2095 | 496 | ProSiteProfiles | WRKY domain profile. | 203 | 261 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 180 | 196 | - | - | |
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 253 | 289 | - | - | |
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 437 | 496 | - | - | |
Mch9g2095 | 496 | Gene3D | WRKY domain | 194 | 262 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | Gene3D | WRKY domain | 367 | 443 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | FunFam | WRKY transcription factor 33 | 369 | 435 | - | - | |
Mch9g2095 | 496 | Pfam | WRKY DNA -binding domain | 383 | 440 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | Pfam | WRKY DNA -binding domain | 203 | 259 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | SMART | WRKY_cls | 202 | 260 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | SMART | WRKY_cls | 382 | 441 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 267 | 289 | - | - | |
Mch9g2095 | 496 | SUPERFAMILY | WRKY DNA-binding domain | 374 | 442 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 180 | 202 | - | - | |
Mch9g2095 | 496 | FunFam | WRKY transcription factor | 190 | 262 | - | - | |
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 335 | 357 | - | - | |
Mch9g2095 | 496 | SUPERFAMILY | WRKY DNA-binding domain | 201 | 261 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | ProSiteProfiles | WRKY domain profile. | 377 | 442 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g2095 | 496 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 128 | 462 | IPR044810 | GO:0003700(InterPro) | |
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 303 | 332 | - | - | |
Mch9g2095 | 496 | MobiDBLite | consensus disorder prediction | 303 | 364 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g2124 | Mch-Chr8:24315307 | Mch9g2095 | Mch-Chr9:21929943 | 6.11E-26 | dispersed | |
Mch9g0642 | Mch-Chr9:4818780 | Mch9g2095 | Mch-Chr9:21929943 | 1.40E-26 | dispersed | |
Mch9g1377 | Mch-Chr9:16164301 | Mch9g2095 | Mch-Chr9:21929943 | 1.31E-14 | dispersed | |
Mch3g0043 | Mch-Chr3:448332 | Mch9g2095 | Mch-Chr9:21929943 | 9.27E-76 | transposed | |
Mch5g1794 | Mch-Chr5:18354580 | Mch9g2095 | Mch-Chr9:21929943 | 1.15E-64 | transposed | |
Mch6g0623 | Mch-Chr6:4214812 | Mch9g2095 | Mch-Chr9:21929943 | 2.21E-46 | transposed | |
Mch6g1412 | Mch-Chr6:12571243 | Mch9g2095 | Mch-Chr9:21929943 | 3.39E-72 | transposed | |
Mch4g2348 | Mch-Chr4:24759190 | Mch9g2095 | Mch-Chr9:21929943 | 2.10E-145 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44113 | PF03106 | WRKY | 9.90E-26 | CL0274 | Mch | TF |
Pathway information
