Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2102 ATGAGTTTCGAACCATCCGGAACTGGCGCCCGGTCGCCGTCGCCGGGAAACTCCGGAGCTAAGGGAAGCTCCTCGTCGTCGTCGGGGGTAACCAAGGAGAAGCAGAAGGAGAAAGCGAGAGTTAGTAGAACGTCACTGATATTGTGGCACGCTCACCAAAACGACTCTGGTGCCGTTCGCAAACTCCTCGAGGAGGATCAGTCCCTCGTCCATGCCAGAGATTACGACAGCCGCACCCCTCTCCATGTTGCATCGCTTCATGGCTGGATCGATGTTGCCAAGTGTTTGATTGAACATGGTGCTGATGTCAATGCCCAAGATCGCTGGAAGAACACTCCGCTAGCTGATGCGGAAGGTGCTAAAAAGCACGGCATGATCGAGTTATTAAAATCTTATGGTGGCCTGTCCTATGGCCAAAATGGAAGCCATTTTGAACCGAAGCCCGTTCCTCCCCCTCTGCCGAATAAATGTGACTGGGAAATTGATCCTTCTGAGCTGGATTTTTCAAACTCAGCTATTATTGGCAAGGGGTCCTTCGGTGAAATTTTGAAGGCCTATTGGCGTGGAACACCTGTAGCTGTCAAACGTATTCTTCCATCGCTTTCAGATGATAGACTAGTGATCCAGGACTTCCGGCATGAGGTTAATCTGTTGGTGAAGCTACGCCACCCTAACATAGTCCAATTTCTTGGAGCTGTCACTGAGAAGAAACCCCTTATGTTAATTACTGAATACTTAAGAGGGGGTGATCTTCACCAATACCTAAAGGATAAAGGTTCGCTCAGTCCTGCAACAGCCATCAATTTTGCACTGGACATCGCCAGGGGAATGGCTTATCTCCACAATGAGCCGAATGTTATAATTCACCGTGACCTAAAACCAAGGAACGTTCTTTTAGTCAATTCCGGTGCAGACCATCTAAAAGTTGGTGATTTCGGTCTAAGCAAGCTCATCAAAGTTCAGAATTCACATGATGTGTACAAAATGACTGGCGAGACCGGAAGCTACCGGTATATGGCTCCTGAAGTTTTTAAACACAGGAAATATGATAAGAAGGTGGATGTGTTTTCTTTTGCAATGATATTATATGAGATGCTTGAGGGAGATCCTCCACTAGCTAATTACGAGCCTTATGAAGCTGCCAAATATGTGGCTGAAGGTCATAGGCCGGTGTTCCGTGCAAAGGGATACCTTCCTGTACTGAGAGAGTTAACAGAAGAATGTTGGGCAGCCGACATGAACAAGAGACCTTCTTTCTTGGAAATTCTCAAAAGACTCGAAAAGATCAAGGAAAATCTACCAACTGATCATCACTGGAATTTATTCAATGCATAA 1335 46.44 MSFEPSGTGARSPSPGNSGAKGSSSSSSGVTKEKQKEKARVSRTSLILWHAHQNDSGAVRKLLEEDQSLVHARDYDSRTPLHVASLHGWIDVAKCLIEHGADVNAQDRWKNTPLADAEGAKKHGMIELLKSYGGLSYGQNGSHFEPKPVPPPLPNKCDWEIDPSELDFSNSAIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSPATAINFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSGADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLANYEPYEAAKYVAEGHRPVFRAKGYLPVLRELTEECWAADMNKRPSFLEILKRLEKIKENLPTDHHWNLFNA 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21974676 21980749 + MC09g1643 Mch9g2102 698984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2102 444 SUPERFAMILY Protein kinase-like (PK-like) 166 439 IPR011009 -
Mch9g2102 444 ProSiteProfiles Protein kinase domain profile. 168 440 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2102 444 PANTHER SERINE-THREONINE PROTEIN KINASE 17 429 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch9g2102 444 MobiDBLite consensus disorder prediction 1 39 - -
Mch9g2102 444 ProSitePatterns Protein kinases ATP-binding region signature. 174 195 IPR017441 GO:0005524(InterPro)
Mch9g2102 444 SUPERFAMILY Ankyrin repeat 47 134 IPR036770 -
Mch9g2102 444 Gene3D Phosphorylase Kinase; domain 1 153 247 - -
Mch9g2102 444 Gene3D - 17 142 IPR036770 -
Mch9g2102 444 ProSiteProfiles Ankyrin repeat region circular profile. 76 108 - -
Mch9g2102 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g2102 444 FunFam Integrin-linked protein kinase family 247 442 - -
Mch9g2102 444 ProSiteProfiles Ankyrin repeat profile. 76 108 IPR002110 GO:0005515(InterPro)
Mch9g2102 444 MobiDBLite consensus disorder prediction 1 30 - -
Mch9g2102 444 SMART serkin_6 168 433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2102 444 FunFam serine/threonine-protein kinase STY8 21 142 - -
Mch9g2102 444 FunFam serine/threonine-protein kinase STY46-like 161 247 - -
Mch9g2102 444 PIRSF ILK 4 444 - -
Mch9g2102 444 Pfam Protein tyrosine and serine/threonine kinase 172 426 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g2102 444 CDD STKc_MAP3K-like 174 426 - -
Mch9g2102 444 Gene3D Transferase(Phosphotransferase) domain 1 248 440 - -
Mch9g2102 444 SMART ANK_2a 76 105 IPR002110 GO:0005515(InterPro)
Mch9g2102 444 Pfam Ankyrin repeats (3 copies) 50 131 IPR002110 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0922 Mch-Chr4:7081844 Mch9g2102 Mch-Chr9:21974676 7.53E-62 dispersed
Mch8g2678 Mch-Chr8:30062394 Mch9g2102 Mch-Chr9:21974676 9.86E-31 dispersed
Mch9g0894 Mch-Chr9:6914541 Mch9g2102 Mch-Chr9:21974676 8.52E-37 dispersed
Mch9g2102 Mch-Chr9:21974676 Mch6g1109 Mch-Chr6:8104667 8.55E-30 dispersed
Mch9g2102 Mch-Chr9:21974676 Mch1g1975 Mch-Chr1:19388249 1.55E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77718 PF07714 PK_Tyr_Ser-Thr 2.80E-63 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2102 - - - 0.0