Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g2134 | CCACCCATGGAATTAGCCTCCTCTTCTTCAATCCCACAACCCATGCTCACGCTCACCTCCTACAGAGAATGCCTCAAGAACCACGCCGCCACCGTCGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTTATGCCTTCACTAACCGCCACCCCCGCCGATCCCACCTCTCTAAACTGCGCTGCTTGTGGCTGCCACCGCAACTTCCACCGCCGAGAACCCGACGATCCCTGGCCAAACCTCGCCGCCCACCGCCGTTACCCTTACCACTCTCATGGGCTCTCAAGCCCGAGCCCAAACAAGGCCCAAAGCCCATCCTCGCCGGTCCCTTTACCAATTTCGCACATACCGCCCCCGCTCCACTTCTCGGCCCCCCACATGTTGCTGGCATTGAGCACCGGAGCGCCACCGGACGACCGCCGTGGCGATCAATTGACATTGAGCCCAAAAGAGAGGAAGAGAAAGAGGACCAAATTCAGCGTGGAGCAGAAGGAGAAGATGTACTTATTCTCGGAGAAAATGGGATGGAAAATTCGCAAAAGTGACGAGAGGTTAGTGGAGGAATTCTGCAATGAAATTGGGATCGGGAAGCGGGTGCTCAGAGTTTGGATGCACAATAACAAA | 621 | 57.33 | PPMELASSSSIPQPMLTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIGKRVLRVWMHNNK | 207 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 22139627 | 22140247 | + | MC09g1673 | Mch9g2134 | 699016 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g2134 | 207 | MobiDBLite | consensus disorder prediction | 129 | 157 | - | - | |
Mch9g2134 | 207 | NCBIfam | homeobox domain, ZF-HD class | 151 | 207 | IPR006455 | - | |
Mch9g2134 | 207 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 21 | 72 | IPR006456 | - | |
Mch9g2134 | 207 | MobiDBLite | consensus disorder prediction | 142 | 157 | - | - | |
Mch9g2134 | 207 | Gene3D | - | 138 | 207 | - | - | |
Mch9g2134 | 207 | MobiDBLite | consensus disorder prediction | 88 | 115 | - | - | |
Mch9g2134 | 207 | SUPERFAMILY | Homeodomain-like | 141 | 207 | IPR009057 | - | |
Mch9g2134 | 207 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 19 | 207 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER) | |
Mch9g2134 | 207 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 21 | 72 | IPR006456 | - | |
Mch9g2134 | 207 | Pfam | ZF-HD protein dimerisation region | 20 | 73 | IPR006456 | - | |
Mch9g2134 | 207 | ProSiteProfiles | 'Homeobox' domain profile. | 149 | 207 | IPR001356 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g0775 | Mch-Chr8:5475107 | Mch9g2134 | Mch-Chr9:22139627 | 1.60E-42 | dispersed | |
Mch8g1659 | Mch-Chr8:14154607 | Mch9g2134 | Mch-Chr9:22139627 | 1.03E-50 | transposed | |
Mch3g1742 | Mch-Chr3:18828988 | Mch9g2134 | Mch-Chr9:22139627 | 2.50E-17 | wgd | |
Mch4g2303 | Mch-Chr4:24466624 | Mch9g2134 | Mch-Chr9:22139627 | 1.36E-16 | wgd | |
Mch6g0231 | Mch-Chr6:1548164 | Mch9g2134 | Mch-Chr9:22139627 | 4.85E-17 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44120 | PF04770 | ZF-HD_dimer | 2.20E-28 | No_clan | Mch | TF |
Pathway information
