Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g2182 | ATGGCCATGGAGTATCTGCATTTCTCGGTGGTGCCGCCGATTGTTCACAGAGACATCACCTCCTCGAATATTTTTGTGGAGAAAGATATGAGAATCAAAGTTGGAGATTTTGGGCTTTCGAGGCTGCTGGTTTTCTCCGATACGACGTCGTCTTCGTCTGGGTATGTCTGCACCGGACCTCAGGGGACGCCCGGTTACTTGGATCCGGACTACCACCGGTCCTTCCGGTTGACGGAGAAAAGTGACGTGTACAGCTTCGGAGTAGTGCTACTGGAGCTGATTTCTGGTCTGAAAGCGGTGGATCAGAGCCGGGACAGGAGAGAAATGGCTCTGGCGGATCTGGTAGTGTCGAAGATCCAAATGGGTCAGCTTCATCAAGTGGTGGATTCCGTTTTGGGTATCGACGGAGAGGTTATCGACGGCGTCGAAGCGGTGGCGGAGCTGGCGTTCCGGTGCGTGGCGGCGGACAAGGACGACCGCCCCGACGCCAAGGAGATCGTGGAGGAGCTTCGGCGGATTCGGAACCGCACACGTGGTGGAGTGGTTCGGTCGTCGATTTCGAACGTGGGTGCTGACGTGGCTAGAAGTTGA | 591 | 56.01 | MAMEYLHFSVVPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVFSDTTSSSSGYVCTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRDRREMALADLVVSKIQMGQLHQVVDSVLGIDGEVIDGVEAVAELAFRCVAADKDDRPDAKEIVEELRRIRNRTRGGVVRSSISNVGADVARS | 196 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 22441647 | 22445832 | + | MC09g_new0474 | Mch9g2182 | 699064 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g2182 | 196 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 187 | - | - | |
| Mch9g2182 | 196 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 2 | 179 | IPR044652 | GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER) | |
| Mch9g2182 | 196 | Pfam | Protein kinase domain | 2 | 168 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch9g2182 | 196 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 176 | IPR011009 | - | |
| Mch9g2182 | 196 | ProSiteProfiles | Protein kinase domain profile. | 1 | 173 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch9g2182 | 196 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 14 | 26 | IPR008266 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Mch9g2182 | 196 | SMART | serkin_6 | 1 | 173 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch9g2182 | Mch-Chr9:22441647 | Mch4g2625 | Mch-Chr4:26441720 | 1.35E-44 | dispersed | |
| Mch9g2182 | Mch-Chr9:22441647 | Mch1g1165 | Mch-Chr1:14092234 | 7.26E-46 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 77721 | PF00069 | Pkinase | 1.90E-20 | CL0016 | Mch | PK |
Pathway information