Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2189 ATGAGTGGATGGGATAGGGTTAGACCATCTAGTTCGAGATTTGGGCGCGGAAACTCAGCAATGCAGGAGAGGACCACCTCTACTACTACGGTTCGGCTCGGGCGAGTCCAGCCGCAGGCCCCAGGATATCGTACCATCTTCTGCAATGATCGCGAGGCCAATTTCATTGTCAAATTCAAGGGGAATTCTGTTTCAACGACTAAGTACAACTTCTTCACTTTCTTTCCGAAAGGGCTGTTCGAACAATTCAGGCGTGTGGCTAACCTATACTTTCTTACCATCTCAATCTTATCCACCACACCTATCAGTCCTGTGCATCCAATTACAAACGTGGTCCCTTTAACTCTGGTTTTACTTGTCTCTCTCATTAAAGAAGCATTTGAGGACTGGAAGCGATTCCAGAACGATATGGCAATTAATAATAATACTGTAGATCTGCTGCAAGATCAAAAGTGGGAGAGCGTTCCTTGGAAAAGGTTGCAGGTTGGGGACATCGTTAGGGTTCGGCAAGATGGATTTTTTCCTGCGGATCTTCTTTTCCTTGCCAGTACAAATCCGGATGGTGTCTGCTACATTGAGACTGCTAATCTGGATGGGGAGACAAATTTGAAGATTAGAAAGGCCCTGGAAAAGACCTGGGATTACCTGACTCCTGAGAAGGCATCAGAATTTAAAGGTGAAGTACAATGTGAGCAACCAAACAATTCACTCTACACTTTCACCGGCAATGCTATTATTCAGAAGCAAACATTACCTCTCAGCCCAAACCAGCTTCTATTGCGAGGATGCAGTCTTAGGAACACTGAGTATATTGTCGGGGCTGTTATTTTTACAGGTCATGAAACAAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGAAGTACTCTGGAGAAAAAACTTGACAAACTTATACTCACACTTTTTGGTACGCTCTTTGCCATGTGTTTGATTGGAGCCATTGGCAGTGGCGTGTTTGTAAACCAAAAGTACTACTACTTGGCTCTTGATAAGGGAGGGGAAAACCAATTTAACCCTCGCAACCGGTTCCTGGTTGTCATTTTGACCATGTTTACTCTGATTACTCTGTACTCAACAATAATTCCTATTTCTCTTTATGTTTCCATTGAGATGATTAAATTTATTCAGTCAACACAATATATCAATAAGGATTTAAATATGTACCATGCTGATAGCAATACCCCTGCACTAGCTAGGACTTCCAATCTGAATGAAGAACTTGGACAGGTAGAATACATCTTTTCAGATAAAACTGGTACTCTTACCAGGAATCTAATGGAGTTCTTTAAGTGCTCAATTGGTGGAGAGATTTATGGCACTGGTATCACTGAAATAGAGAGGGGAATTGCTGAGAAGAATGGGATGAAAGTGGAAGAGGTTCATATATCAGCTGATGCTGTACAAGAAAAGGGATTTAATTTTAATGATGCTAGGCTTATGAGAGGGGCATGGAGAAACGAGCCCAATTCTGATCTTTGTAAGGAATTTTTCAGATGCCTTGCTATCTGCCATACCGTACTCCCTGAGGGTGATGAATCCCCTGAAAAGATTACATATCAAGCAGCATCACCTGATGAGGCTGCCTTGGTAACTGCTGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGGACACCTACTACGATATATGTTCGGGAATCTCATGTTGAGAAGATGGGTAAAATCCAAGATGTTTCTTATGAAATTCTCAATGTTCTTGAGTTCAATAGTACAAGGAAGCGTCAGTCTGTGGTGTGCCGTTATTCAGATGGTAGGCTTGTCTTATACTGCAAGGGTGCTGATACTGTAATATACGAGAGAATGGCTGGTGGAAATGACGATCTGAAGAATGTAACTAGGGAACACTTGGAGAAATTCGGATCTTCTGGTTTGAGAACCCTATGCCTTGCTTATAGAGATTTGCATCCTGATGTATATGAAAGCTGGAATGAGAAATTTATTCAAGCCAAGTCTTCATTGAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGACCTTATTTTGATTGGCTGTACTGCTATAGAAGACAAGCTTCAAGAAGGAGTACCAAACTGTATACAGACACTTTCTAGAGCTGGTATCAAGATTTGGGTACTAACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCTTGCAATTTAATAAACAATGAAATGAAACAATTTATTATCAGTTCAGAAACAGATGCAATCAGAGAAGTCGAAAACAGGGGTGACCAAGTGGAACTTGCACGTTTTATTAGAGAAGAAGTAAAAACGGAACTGAAGAGATGTCTTCAGGAAGCACAGCAGTGTTTCCGGTCTCTGTCTCCTCCAAAATTAGCTCTTGTTATAGATGGAAAATGTTTGATGTACGCATTGGATCCAAGTTTGCGAGTTAATTTACTAAATTTGAGCTTGAATTGTAGTTCGGTTGTTTGCTGCCGAGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTCTGGTGAAAAAGGGTGCACAGAAAATAACACTTAGTATTGGTGATGGTGCTAACGATGTTAGCATGATTCAAGCAGCTCACGTGGGCATTGGAATAAGTGGGCAGGAGGGAATGCAAGCAGTGATGGCTAGTGATTTTGCAATTGCCCAGTTTCGCTTTCTCACAGATTTACTTCTTGTGCATGGGCGATGGTCATATCTTAGAATATGCAAGGTTGTTACATACTTCTTTTACAAGAATCTTACGTTCACCTTAACTCAGTTTTGGTTCACCTTTCAAACTGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAGTCATTGTATAATGTCATATTCACTGCCCTACCTGTAATAATTGTCGGACTATTTGACAAGGACGTCAGTGCTTCCCTATCCAAAAAGTACCCTGAGCTCTACAGAGAGGGAATAAGAAATGTATTTTTCAAGTGGAGAGTTGTGACTACTTGGGCTTTCTTTTCAATCTACCAATCTTTAGTCTTTTATTATTTTGTAACCATTTCCAGTTCCGGCAGTCAAGCGTCATCTGGCAAGATGTTTGGTCTGTGGGATATCAGCACGATGGCTTTCACATGCATTGTAGTAACTGTTAATTTGCGGCTGCTTTTGATCTGCAATTCAATTACCAGGTGGCATTCCATTACGGTTGGAGGAAGCATTTTAGCATGGTTCATATTTATTTTCTTATATTCTGGTATTATGACATCACGTGATAGGCAGGAAAATGTATATTTTGTCATATATGTCTTAATGAGTACATTCTACTTTTACGTGGCCGTCCTTCTCGTCCCCGTTGTTGCACTTCTTTGTGATTTTGCTTATCAAGGCCTCCAGAGATGGTTTTTCCCCTACGATTATCAGATTGTTCAAGAAATTCATAGACATGAACCTGAAGGTAGAAGTACAGCGGGATTTCTGGAGATTCAGAACCGTCTTACACCGGAAGAGGCAAGAAGCTATGCCATGACTCAACTCCCTCGAGAGTTATCAAAGCACACTGGCTTTGCCTTCGACTCACCTGGCTACGAGTCATTCTTTGCTGCACAGCTCGGTATTTATGCACCACAGAAGGCATGGGATGTTGCTAGGAGAGCCAGTGTGAAGTCGAGACCAAAGATTAGGGAAAAGAAATGA 3681 41.24 MSGWDRVRPSSSRFGRGNSAMQERTTSTTTVRLGRVQPQAPGYRTIFCNDREANFIVKFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLTLVLLVSLIKEAFEDWKRFQNDMAINNNTVDLLQDQKWESVPWKRLQVGDIVRVRQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNAIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFGTLFAMCLIGAIGSGVFVNQKYYYLALDKGGENQFNPRNRFLVVILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMYHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGIAEKNGMKVEEVHISADAVQEKGFNFNDARLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYSDGRLVLYCKGADTVIYERMAGGNDDLKNVTREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVELARFIREEVKTELKRCLQEAQQCFRSLSPPKLALVIDGKCLMYALDPSLRVNLLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNVFFKWRVVTTWAFFSIYQSLVFYYFVTISSSGSQASSGKMFGLWDISTMAFTCIVVTVNLRLLLICNSITRWHSITVGGSILAWFIFIFLYSGIMTSRDRQENVYFVIYVLMSTFYFYVAVLLVPVVALLCDFAYQGLQRWFFPYDYQIVQEIHRHEPEGRSTAGFLEIQNRLTPEEARSYAMTQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVARRASVKSRPKIREKK 1226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22482405 22496190 + MC09g1715 Mch9g2189 699071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2189 1226 FunFam Phospholipid-transporting ATPase 531 686 - -
Mch9g2189 1226 Gene3D - 534 687 IPR023299 GO:0000166(InterPro)
Mch9g2189 1226 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1145 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0048194(PANTHER)|GO:0140326(PANTHER)
Mch9g2189 1226 FunFam Phospholipid-transporting ATPase IC 419 431 - -
Mch9g2189 1226 Pfam Phospholipid-translocating P-type ATPase C-terminal 882 1132 IPR032630 -
Mch9g2189 1226 SFLD p-type atpase 404 905 IPR044492 -
Mch9g2189 1226 Pfam Cation transport ATPase (P-type) 518 614 - -
Mch9g2189 1226 NCBIfam phospholipid-translocating P-type ATPase 59 1140 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Mch9g2189 1226 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1132 IPR023298 -
Mch9g2189 1226 CDD P-type_ATPase_APLT_Dnf-like 61 1014 - -
Mch9g2189 1226 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Mch9g2189 1226 MobiDBLite consensus disorder prediction 12 30 - -
Mch9g2189 1226 FunFam Phospholipid-transporting ATPase 687 894 - -
Mch9g2189 1226 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 693 IPR023299 GO:0000166(InterPro)
Mch9g2189 1226 Gene3D - 688 894 IPR023214 -
Mch9g2189 1226 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Mch9g2189 1226 Pfam Phospholipid-translocating ATPase N-terminal 46 110 IPR032631 -
Mch9g2189 1226 SFLD Haloacid Dehalogenase 404 905 - -
Mch9g2189 1226 SUPERFAMILY HAD-like 410 897 IPR036412 -
Mch9g2189 1226 NCBIfam HAD-IC family P-type ATPase 827 933 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch9g2189 1226 MobiDBLite consensus disorder prediction 1 30 - -
Mch9g2189 1226 Gene3D - 124 289 - -
Mch9g2189 1226 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Mch9g2189 1226 PRINTS P-type cation-transporting ATPase superfamily signature 854 873 - -
Mch9g2189 1226 FunFam Phospholipid-transporting ATPase 120 289 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1953 Mch-Chr4:22005042 Mch9g2189 Mch-Chr9:22482405 2.35E-201 dispersed
Mch4g1954 Mch-Chr4:22020178 Mch9g2189 Mch-Chr9:22482405 3.60E-218 dispersed
Mch9g2015 Mch-Chr9:21431339 Mch9g2189 Mch-Chr9:22482405 3.22e-319 dispersed
Mch9g2189 Mch-Chr9:22482405 Mch3g1659 Mch-Chr3:18321366 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2189 K14802 - csv:101207069 2292.69