Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2201 ATGGCTCTGCTTCTTCAGCTTCAGCTTCAGTTTCAGCCATGGCGTCTTCTTCTCTTCTTATTTTTTCTCTCTGTTTCCCCTGTTTGTTATTGCCAATTCAGTCCCCCTCAAAATATCGAAACTTCCTACCCTTTATTCCCAATTATTTCTCCCCCACCATCGCCACTGCCGCCCTCCTCCTCACTCCACCAGCCGTCGCCGTCCACGTCGGCTAAGACCATCGCGACGGCGGTGGCCGTCACTGCAGTGGGTGTGGCTCTGATTTCGACGTTGTTCTTTTTCTTAATCCAGAGATATCTGATTAGAAGACGGAAAAAGGAGGTAGCTCCGGGTTCGGGTCCGGGTTTGGGTCCGGGGCCGGTGTCGCAGGCTGCAGTTTCTCAGACTCAGAGTGAATTTTCGCGTCTTGATGGGAATCTTAAGGGATTTATTGTGGATGAAAATGGGTTGGATGTGATTTATTGGAAAAGACTTGAGAGAAGGAAATCCAAGAATAGCTCTGATCCGAGTAATGGAAATGGAGAAGGAGAAAATGTTAAAGGAAATCGGAGCAAAAAGTCAGAGCCTGTTCAAGAAATTCCGCTGCTTCGAGGAAAGTCTTCGAGTTCACATGTCAAAATTGCACCGGAAGAGGAGGAGCCGACTCGGATTGGGATTACATCTCCGCCGCCCCCTCCGCCGCCGCAACAGCCGCCCCATATTACCAATCCTCCGCGATTTACTGCGAATTCTGTTCAGGCAGTTGGAAAACCAGCGAGTAGTTCAATTCTTGCGTCCACACCGCCGCCGCAGCCGGCGGCGCCCCCGCCACAATCTCTCTTGGCTGTTCCGCCACCACCGCTGCCGATTCCAATTCCGGCCAAGGCCAATTCGAGACCACCACCACCGCCGCCTCCGATTGCGGCCAAGACCAATTCAAGACCGCCGCCGCCGCCCCCAATTCCAGCCAAGACCAATTCAGCTCCACCACCTCCTCCTCCGATTCCATCCAAGGGAAATCCGGCAGCACCACCACCTCCGCCGCCCAAGGCCGGCGGTTCCAAATTGCCGCTAAGGGCGACCGCAGCAGTTCCAAAAGGGGCCAAATCGTCAGCAGAGTCGTCTTCATCTACGGCAGCGGATAATGGTCAGGTTAAAATGAAGCCTCTGCATTGGGATAAAGTGAACACTGCAAATGCCGATCATTCCATGGTTTGGGACAAAATGAGCGCCGGTTCTTTCAAATTTGATGGGGATCTTATGGAAGCTCTGTTCGGATACGTGGCGACCAACCGGAAATCCCCCCGGAGTGAGGCTAATTCTTCAGCAAACGCCGGCGGCCGGAACTCAGGGCCAGCGCAGATCTTCATTCTTGAACCCAAAAAGTCTCAGAACATAGCCATTGTAGTCAAGTCCTTAACCATTCCACGCAACGAGATCCTCGATGCCCTCAACGAAGGCCAAGGCCTCGAAACAGAGATTCTTGAAAAACTCGCCAGAATTTCTCCGACCAAAGAAGAAATTTCCCAAATTCTTGCGTACAATGGAGACCCCCAGAAGCTTGCTGATGCCGAATCCTTCCTTTTCCATATCCTCAAATCGGTTCCATCTGCGTTTACGCGCTTCAACGCCATGCTTTTCCGATTGAATTACGGCTCGGATATCCTCCATTTGAAGGAATCTCTACAAACTCTGGAATCGGCCTGCAAAGAGCTTAGAACTCGAGGGCTGTTTTTGAAACTGCTTGAAGCAATCCTCAAAGCTGGGAATCGCCTGAATGCAGGAACTGCGAGAGGAAATGCCAGAGCTTTCAATCTTACAGCTCTTCGGAAGCTCTCTGATGTTAGAAGCACTGACGGGAAAACCACATTACTTCACTTTGTGGTGGAAGAAGTTATAAGGGCAGAAGGGAAAAGGTGTGTCCTAAACAGGAACAAGAGCTTGAGCCGTAACAGCAGCCATGGCAGCGACAACAGCTTCAGTAGCTCCGAAAATTCTACTTCGAAGGAGGACAGAGTAAAGGAATATATGATGTTGGGATTGCCAGTGGTGGGAGGTCTGAGTGCTGAGTTCTCTAATGTAAAGAAAGCAGCCGGGATCGATTACGAGAGCTTCGCCAACTCCACCTCGTCTCTGATAGGCCGCACCGCAGAAATCCGGCAAATTTTGGCTCAGATTGGGAATAATGGAGGTGGGTTTGCAAAAGAAATGAGAGGGTTTCATGAAGCAGCAGAGGGTGAGCTGAAGGTGTTGAGGGAAGAACTGACGAAGGTGATGGAGCTTGTGAAGAAGACAACAGAGTATTATCAGGCGGGAAGTTCAAAAGATAAAGAAGCAAATCGGCTTCAATTATTCATCATAGTTAAAGATTTTCTAGAAATGGTGGATCGGGTGTGTGTTGAAATTGCTCGAAATCTCCAAAGGAGAAGAACATCAGCAGTAAATTTGGGTTCATCACCGGGGAGAACGAAAGCCGTCTTCCCAAACTTGCCGGAAAATTTTATGTCAGACAAGTCCAGAGGCAATTCTAGTGATTCAGACAATGATTTCTGA 2532 49.88 MALLLQLQLQFQPWRLLLFLFFLSVSPVCYCQFSPPQNIETSYPLFPIISPPPSPLPPSSSLHQPSPSTSAKTIATAVAVTAVGVALISTLFFFLIQRYLIRRRKKEVAPGSGPGLGPGPVSQAAVSQTQSEFSRLDGNLKGFIVDENGLDVIYWKRLERRKSKNSSDPSNGNGEGENVKGNRSKKSEPVQEIPLLRGKSSSSHVKIAPEEEEPTRIGITSPPPPPPPQQPPHITNPPRFTANSVQAVGKPASSSILASTPPPQPAAPPPQSLLAVPPPPLPIPIPAKANSRPPPPPPPIAAKTNSRPPPPPPIPAKTNSAPPPPPPIPSKGNPAAPPPPPPKAGGSKLPLRATAAVPKGAKSSAESSSSTAADNGQVKMKPLHWDKVNTANADHSMVWDKMSAGSFKFDGDLMEALFGYVATNRKSPRSEANSSANAGGRNSGPAQIFILEPKKSQNIAIVVKSLTIPRNEILDALNEGQGLETEILEKLARISPTKEEISQILAYNGDPQKLADAESFLFHILKSVPSAFTRFNAMLFRLNYGSDILHLKESLQTLESACKELRTRGLFLKLLEAILKAGNRLNAGTARGNARAFNLTALRKLSDVRSTDGKTTLLHFVVEEVIRAEGKRCVLNRNKSLSRNSSHGSDNSFSSSENSTSKEDRVKEYMMLGLPVVGGLSAEFSNVKKAAGIDYESFANSTSSLIGRTAEIRQILAQIGNNGGGFAKEMRGFHEAAEGELKVLREELTKVMELVKKTTEYYQAGSSKDKEANRLQLFIIVKDFLEMVDRVCVEIARNLQRRRTSAVNLGSSPGRTKAVFPNLPENFMSDKSRGNSSDSDNDF 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22560713 22567734 - MC09g1726 Mch9g2201 699083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2201 843 Pfam Formin Homology 2 Domain 375 788 IPR015425 -
Mch9g2201 843 ProSiteProfiles Formin homology-2 (FH2) domain profile. 370 814 IPR015425 -
Mch9g2201 843 Coils Coil 734 754 - -
Mch9g2201 843 MobiDBLite consensus disorder prediction 639 661 - -
Mch9g2201 843 MobiDBLite consensus disorder prediction 261 346 - -
Mch9g2201 843 Coils Coil 548 568 - -
Mch9g2201 843 PANTHER FORMIN-RELATED 35 840 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Mch9g2201 843 MobiDBLite consensus disorder prediction 218 235 - -
Mch9g2201 843 MobiDBLite consensus disorder prediction 805 843 - -
Mch9g2201 843 MobiDBLite consensus disorder prediction 161 381 - -
Mch9g2201 843 Gene3D Formin, FH2 domain 390 808 IPR042201 -
Mch9g2201 843 MobiDBLite consensus disorder prediction 361 376 - -
Mch9g2201 843 MobiDBLite consensus disorder prediction 108 130 - -
Mch9g2201 843 MobiDBLite consensus disorder prediction 236 260 - -
Mch9g2201 843 SUPERFAMILY Formin homology 2 domain (FH2 domain) 322 803 - -
Mch9g2201 843 MobiDBLite consensus disorder prediction 639 659 - -
Mch9g2201 843 SMART it6_source 370 803 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2030 Mch-Chr8:22748501 Mch9g2201 Mch-Chr9:22560713 3.03E-144 dispersed
Mch9g1150 Mch-Chr9:12132431 Mch9g2201 Mch-Chr9:22560713 1.65E-72 dispersed
Mch9g2201 Mch-Chr9:22560713 Mch11g1148 Mch-Chr11:8056654 5.75E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2201 K28090 - csv:101208197 994.571