Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2202 ATGGCCAGAACCCCTGTCTTCTCCCGCCGGCGGAGGCCGGACCAGATCGACGCCTTAGATCGCATCCCCACCTCTGATTCCGAGGTCCATGTTCTCGCCGTCGACGACAGCCTCGTCGACCGTAAAGTAATTGAGCGTCTTCTCCGCCTTACCGCCTGCCGAGTTACTGCGGTGGATAGTGGAATTAGAGCTCTGCAATACCTTGGATTGCAAGACGAGACCAATTCCCCTGTTGGTTATGATGGGTTGAAGGTGGATATGATCATCACCGATTACTGCATGCCCGGAATGACTGGTTACGAATTGCTCAAGAAAATTAAGGAATGTTCTGCTCTGAGGGAGATACCGGTGGTGATTATGTCGTCGGAGAACGTGGTGGCGCGTATAGACAGATGTTTGGAGGAAGGGGCGGAGGATTTCATAGTGAAGCCGGTGAAGTTATCAGATGTGAAGCGGCTCAGGGAATATATGGTGGGGGACGAAAAGACTGCGACTCAGAGGAGTGGGATCAACAAGAGGAAGCTACGAGAGCCGTGCGATCACGCCTCATCGTCACCGTCTATTTCATCATCCGATTCCGCTCCATCTCCATCGCCGTCAGATTCGCTTCAATCCACCCCATCTTCGTCAGAACCATCTTCTCCGACGTCTACTCTTCAATCCGACGGCTCTAAATGA 678 52.65 MARTPVFSRRRRPDQIDALDRIPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSPVGYDGLKVDMIITDYCMPGMTGYELLKKIKECSALREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTATQRSGINKRKLREPCDHASSSPSISSSDSAPSPSPSDSLQSTPSSSEPSSPTSTLQSDGSK 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22574997 22576619 - MC09g1727 Mch9g2202 699084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2202 225 SUPERFAMILY CheY-like 29 156 IPR011006 -
Mch9g2202 225 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 214 IPR045279 GO:0009736(InterPro)
Mch9g2202 225 ProSiteProfiles Response regulatory domain profile. 30 158 IPR001789 GO:0000160(InterPro)
Mch9g2202 225 SMART REC_2 29 154 IPR001789 GO:0000160(InterPro)
Mch9g2202 225 CDD REC_typeA_ARR 31 153 - -
Mch9g2202 225 Pfam Response regulator receiver domain 31 150 IPR001789 GO:0000160(InterPro)
Mch9g2202 225 MobiDBLite consensus disorder prediction 161 180 - -
Mch9g2202 225 MobiDBLite consensus disorder prediction 182 225 - -
Mch9g2202 225 MobiDBLite consensus disorder prediction 161 225 - -
Mch9g2202 225 Gene3D - 29 193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0440 Mch-Chr1:8680262 Mch9g2202 Mch-Chr9:22574997 4.80E-49 dispersed
Mch9g1380 Mch-Chr9:16186608 Mch9g2202 Mch-Chr9:22574997 4.62E-47 dispersed
Mch9g1736 Mch-Chr9:19355098 Mch9g2202 Mch-Chr9:22574997 1.75E-40 dispersed
Mch6g0185 Mch-Chr6:1237275 Mch9g2202 Mch-Chr9:22574997 2.46E-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44129 PF00072 Response_reg 3.70E-21 CL0304 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2202 K14492 - csv:101209506 333.183