Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g2202 | ATGGCCAGAACCCCTGTCTTCTCCCGCCGGCGGAGGCCGGACCAGATCGACGCCTTAGATCGCATCCCCACCTCTGATTCCGAGGTCCATGTTCTCGCCGTCGACGACAGCCTCGTCGACCGTAAAGTAATTGAGCGTCTTCTCCGCCTTACCGCCTGCCGAGTTACTGCGGTGGATAGTGGAATTAGAGCTCTGCAATACCTTGGATTGCAAGACGAGACCAATTCCCCTGTTGGTTATGATGGGTTGAAGGTGGATATGATCATCACCGATTACTGCATGCCCGGAATGACTGGTTACGAATTGCTCAAGAAAATTAAGGAATGTTCTGCTCTGAGGGAGATACCGGTGGTGATTATGTCGTCGGAGAACGTGGTGGCGCGTATAGACAGATGTTTGGAGGAAGGGGCGGAGGATTTCATAGTGAAGCCGGTGAAGTTATCAGATGTGAAGCGGCTCAGGGAATATATGGTGGGGGACGAAAAGACTGCGACTCAGAGGAGTGGGATCAACAAGAGGAAGCTACGAGAGCCGTGCGATCACGCCTCATCGTCACCGTCTATTTCATCATCCGATTCCGCTCCATCTCCATCGCCGTCAGATTCGCTTCAATCCACCCCATCTTCGTCAGAACCATCTTCTCCGACGTCTACTCTTCAATCCGACGGCTCTAAATGA | 678 | 52.65 | MARTPVFSRRRRPDQIDALDRIPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSPVGYDGLKVDMIITDYCMPGMTGYELLKKIKECSALREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTATQRSGINKRKLREPCDHASSSPSISSSDSAPSPSPSDSLQSTPSSSEPSSPTSTLQSDGSK | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 22574997 | 22576619 | - | MC09g1727 | Mch9g2202 | 699084 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g2202 | 225 | SUPERFAMILY | CheY-like | 29 | 156 | IPR011006 | - | |
Mch9g2202 | 225 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 27 | 214 | IPR045279 | GO:0009736(InterPro) | |
Mch9g2202 | 225 | ProSiteProfiles | Response regulatory domain profile. | 30 | 158 | IPR001789 | GO:0000160(InterPro) | |
Mch9g2202 | 225 | SMART | REC_2 | 29 | 154 | IPR001789 | GO:0000160(InterPro) | |
Mch9g2202 | 225 | CDD | REC_typeA_ARR | 31 | 153 | - | - | |
Mch9g2202 | 225 | Pfam | Response regulator receiver domain | 31 | 150 | IPR001789 | GO:0000160(InterPro) | |
Mch9g2202 | 225 | MobiDBLite | consensus disorder prediction | 161 | 180 | - | - | |
Mch9g2202 | 225 | MobiDBLite | consensus disorder prediction | 182 | 225 | - | - | |
Mch9g2202 | 225 | MobiDBLite | consensus disorder prediction | 161 | 225 | - | - | |
Mch9g2202 | 225 | Gene3D | - | 29 | 193 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g0440 | Mch-Chr1:8680262 | Mch9g2202 | Mch-Chr9:22574997 | 4.80E-49 | dispersed | |
Mch9g1380 | Mch-Chr9:16186608 | Mch9g2202 | Mch-Chr9:22574997 | 4.62E-47 | dispersed | |
Mch9g1736 | Mch-Chr9:19355098 | Mch9g2202 | Mch-Chr9:22574997 | 1.75E-40 | dispersed | |
Mch6g0185 | Mch-Chr6:1237275 | Mch9g2202 | Mch-Chr9:22574997 | 2.46E-60 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44129 | PF00072 | Response_reg | 3.70E-21 | CL0304 | Mch | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch9g2202 | K14492 | - | csv:101209506 | 333.183 |