Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2211 CAGACAAACGATGCAACCCTCCAAGCCCCAACTTCAACCAAACCCCTTTTTCTTCACATCACACCGGCGTTAAAGATTCCGTCCACTTCTCCGATCTCTTCTCCGGCGACTTTTCAATCTCCCTCATCGGGACGATGGGAAGAGAATGAGGAGCTAGAAGCGGCGATCATGTCCGTGTCGATTTCCAAGTGCTTCTCCGATTTACTCTGCCAGGAGGATTCCTCCGGCGTCTTGTCCGGCGAGTCGCCGGGATGTTCTTCCGACCTCGATTGTACAGCCTGCGTCGAGGAATCTATTGCCGCTTTAATAGAGGACGAGCGGCACTTCGTCCCCGGTTACGACTACTTGTCCCGCTTCCAGTCTCCGTCGCTGGACGCCGCCGCTAGATTAGACTCTGTTGCATGGATTCTTAAGATCCGAATCGATCGACTCGGCGTCCGTGCCGGTGGCCGTCGGCGAATCTGTTTAATATATTATTATTATTTATCTCCGTCTCCGTCGCACGGTGGTTATATATCCGATTATCTCTTGCAGGTTCAATCCTACTACGGTTTTCAGCCGTTGACGGCGTATCTCTCCGTCAACTATTTGGATCGCTTCCTTTGTTCTCGCCGTTTGCCGCAAACAAATGGGTGGCCTCTGCAACTCCTCTCGGTTGCTTGCCTCTCACTGGCTGCTAAAATGGAGGAACCTCTGGTTCCTGCTTTACTGGATCTTCAGGTTGAGGGGGTTAAATATATATTTGAACCAAGAACAATATGCAGGATGGAATTGCTGGTGCTGAGGGTATTGGATTGGCGGCTGCGTTCTATAACGCCGTTCAATTTCATTGCGTTCTTTGCTTGCAAGCTCGATCCCTCCGGGGATTTCATCGGCTTTCTTATTTCGCGAGCTACAGAAATTATACTATCGAATATCCGAGAGGCTATGTTTGTGGAGTACTGGCCATCGTGTATAGCGGCGGCCGCGTTGCTTTGTGCAGCAAATGAAGTCCCGAATTTGTCTGTTGTCAATCCAGAACAAGCCGAATCGTGGTGCAGTGGTCTAAGGAAAGAAAATATCACCGGTTGCTACCGGTTAATGCAAGAGATTGTGGTTGATAGTAGCCGGAGCAAGTGCCCCAAAATCTTACCTCAGTTTAGAGTGACAGTCCGCACTAGAATGAGATCAAGGGACTCACCCTCCTACTCCTCCTCTTCATCATCTTCGTCATCACCAAACAAAAGGAGAAAATTAAACCACAACCACTGGGTAGATGATGACAAAGGTAACACCGAAGAATGA 1284 49.38 QTNDATLQAPTSTKPLFLHITPALKIPSTSPISSPATFQSPSSGRWEENEELEAAIMSVSISKCFSDLLCQEDSSGVLSGESPGCSSDLDCTACVEESIAALIEDERHFVPGYDYLSRFQSPSLDAAARLDSVAWILKIRIDRLGVRAGGRRRICLIYYYYLSPSPSHGGYISDYLLQVQSYYGFQPLTAYLSVNYLDRFLCSRRLPQTNGWPLQLLSVACLSLAAKMEEPLVPALLDLQVEGVKYIFEPRTICRMELLVLRVLDWRLRSITPFNFIAFFACKLDPSGDFIGFLISRATEIILSNIREAMFVEYWPSCIAAAALLCAANEVPNLSVVNPEQAESWCSGLRKENITGCYRLMQEIVVDSSRSKCPKILPQFRVTVRTRMRSRDSPSYSSSSSSSSSPNKRRKLNHNHWVDDDKGNTEE 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22631366 22635291 + MC09g1736 Mch9g2211 699093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2211 427 CDD CYCLIN_AtCycD-like_rpt2 271 361 - -
Mch9g2211 427 SMART Cyclin_C_2 271 405 IPR004367 -
Mch9g2211 427 MobiDBLite consensus disorder prediction 389 408 - -
Mch9g2211 427 SUPERFAMILY Cyclin-like 170 268 IPR036915 -
Mch9g2211 427 SUPERFAMILY Cyclin-like 253 366 IPR036915 -
Mch9g2211 427 CDD CYCLIN_AtCycD-like_rpt1 174 266 - -
Mch9g2211 427 PANTHER CYCLINS 169 368 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Mch9g2211 427 Gene3D - 263 391 - -
Mch9g2211 427 Pfam Cyclin, N-terminal domain 171 269 IPR006671 -
Mch9g2211 427 Gene3D - 165 262 - -
Mch9g2211 427 MobiDBLite consensus disorder prediction 388 427 - -
Mch9g2211 427 Pfam Cyclin, C-terminal domain 271 381 IPR004367 -
Mch9g2211 427 MobiDBLite consensus disorder prediction 412 427 - -
Mch9g2211 427 FunFam D6-type cyclin 170 269 - -
Mch9g2211 427 SMART cyclin_7 174 262 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0416 Mch-Chr10:2749009 Mch9g2211 Mch-Chr9:22631366 1.52E-56 dispersed
Mch11g0361 Mch-Chr11:2235712 Mch9g2211 Mch-Chr9:22631366 6.32E-34 dispersed
Mch8g0665 Mch-Chr8:4726293 Mch9g2211 Mch-Chr9:22631366 4.58E-33 dispersed
Mch9g2211 Mch-Chr9:22631366 Mch8g0255 Mch-Chr8:1702853 1.08E-43 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2211 K18810 - csv:101209417 528.865