Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2224 ATGGCATCAAGATCGTCCTCAAACTTTTTAGACCTGGCTTCGGGAGATTTACTGGATGTTCCTCGTACACCTAGGTCCCTGCCACGAGTAATGACTGTTCCCGGAATTATTTCTGAATTGGATGATTATGGGAGCAACGACGGAGATTCGGAGTCTTCATCTGTATACCGTGAGCGGAAGATTATAGTTGCAAATATGTTGCCCTTGCAAGCTAAAAAAGATGGGCAGTCTGGCAAATGGTGCTTCAGTTTAGACGAGGATTCAATTCTATTGCAGGCAAAGGATGGGTTTTCACCTGAGACAGAGGTTATATACGTAGGTTCCCTCAAAGTTGAAATCGATGCCAGCGAACAGGAAGAGGTTGCTCAGAAGCTGTTCGACAATTTTCAGTGTGTACCTACATTTCTACCTTATGATCTCCAGAAGAAATTCTATCTTGGGTTCTGCAAACAGCAGCTATGGCCCTTATTCCATTACATGCTACCCATGTGCCCAGAACACGGTGACCGCTTCGATCGGCTGCTTTGGCAAGCCTATGTTTCTGCAAATAAGATATTTGCTGACAAGGTAATGGAGATCATCAATCCTGAGGAAGATTCTGTTTGGGTTCAGGATTATCATTTAATGGTTCTTCCGACGTTTTTGAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTCCTGCATAGCCCATTTCCGTCATCAGAAATATACCGTACTTTACCAGTTCGAGATGAGATTCTCCGTGGCCTGCTAAATTGTGATTTAGTTGGTTTTCATACGTTTGATTATGCTCGTCACTTCCTCTCTTGCTGTAGCAGAATGTTGGGCCTGGACTATGAATCTAAGCGGGGACATATTGGACTAGATTATTTTGGCCGCACCGTATATATCAAAATTCTGCCTGTGGGCATTCACATGGGTAGGCTAGAATCAGTGATGAATCTTCCATCTACATCTGCTAAAGCCAGAGAAATTCGAGATCAGTTCATGGGGAAGAAATTAATTCTTGGTATTGATGACATGGATATTTTTAAGGGTATAAGCCTGAAGCTGCTCGCCGTTGAACAGCTTTTACGGCAGCATCCTGAGTTGCGGGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGTTCAGGGAAAGATGTACATGAAGCTCAGAAGGAAACGTACTTAGCTGCTGAAAGGATCAATGAAGCTTATGGTTCAAATAACTACAAACCAGTAATTCTGATTGATCGCCCCGTTCCACGTTTTGAGAAGACTGCTTATTATGCTTTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGTATGAATTTGGTTCCATATAAGTATGTTGTTTGCAGGCAAGGAACTCCCCATATGGATGAGGCTATGGGCATAGAAGTTGGTTCTCCTCGGACGAGCATGCTTGTAGTGTCTGAATTTATTGGCTGCTCGCCTTCTTTAAGTGGGGCTATCAGGGTTAACCCTTGGGATATTGATGCTGTTGCCGATGCCTTGGAACTGGCCATAACCATGCAGGAGTCAGAGAAGCAGTTGCGGCACGAGAAACATTATCGATATGTCAGTTCCCATGATGTAGGATATTGGTCTCGCAGTTTTATGCAAGATTTAGAGAGAGCATGTCTAGATCACTACAGTAAACGGTGCTGGGGAATTGGGTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGCTTTAGAAAGTTATCAATTGATCACATTGTCTCAGCTTATAAAAGAACACATAGAAGGGCGATATTTTTGGATTACGATGGCACTATTATCTCACAAAGCTCTATAATTAAGACACCAAGCCCTGAAGTTATCTCTGTTTTGACCACGCTTTGCAATGACCCGTGTAACACCGTGTTCATTGTTAGTGGGAGGGGAAGAAGTTCTTTAGGTCAGTGGTTTGCCTCTTGTGAGATGTTGGGACTTGCAGCAGAACATGGGTACTTTATAAGGTGGGGTGGAACTTCAGAATGGGAACTCAGTCCGTTGTCTTCTGATCTGGATTGGATTAAGATTGTAGAGCCAGTGATGAGACTATATACGGAAGCAACAGATGGCTCGTGCATAGAAACCAAAGAGAGTGCTCTAGTCTGGCATCATCAAGATGCTGATTCCGACTTCGGATCCTGTCAAGCTAAGGAATTGCTGGACCATCTAGAAAACGTACTTGCCAACGATCCAGTCGTCGTTAAAAGGGGCCAGCATATTGTTGAAGTGAAGCCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAAAAGGTTCTCTCGAGAATGGTGAATAGTGGAAGACCACCTGATTTCGTTATGTGCATTGGAGATGATAGATCAGATGAAGATATGTTTGAAAGCATATTAAGCACAGTCTCTAGTCCATCCTTGCCTTCCGCTCCAGAAATTTTTGCCTGCACTGTTGGGCGAAAGCCAAGCAAGGCGAAGTTTTACCTCGATGATACTTCCGACGTCGTGAAATTGCTGCAAGGCCTTGCCTTTTCTTCACGTCCGAGACCTCGGCATCTACCACAAATGCGAGTTTCTTTTGAGAGTGTTTTTTGA 2583 44.06 MASRSSSNFLDLASGDLLDVPRTPRSLPRVMTVPGIISELDDYGSNDGDSESSSVYRERKIIVANMLPLQAKKDGQSGKWCFSLDEDSILLQAKDGFSPETEVIYVGSLKVEIDASEQEEVAQKLFDNFQCVPTFLPYDLQKKFYLGFCKQQLWPLFHYMLPMCPEHGDRFDRLLWQAYVSANKIFADKVMEIINPEEDSVWVQDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVMNLPSTSAKAREIRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRQHPELRGKIVLVQIVNPARGSGKDVHEAQKETYLAAERINEAYGSNNYKPVILIDRPVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYVVCRQGTPHMDEAMGIEVGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALELAITMQESEKQLRHEKHYRYVSSHDVGYWSRSFMQDLERACLDHYSKRCWGIGLGLRFRVVSLSPGFRKLSIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLTTLCNDPCNTVFIVSGRGRSSLGQWFASCEMLGLAAEHGYFIRWGGTSEWELSPLSSDLDWIKIVEPVMRLYTEATDGSCIETKESALVWHHQDADSDFGSCQAKELLDHLENVLANDPVVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVNSGRPPDFVMCIGDDRSDEDMFESILSTVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQGLAFSSRPRPRHLPQMRVSFESVF 860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22716852 22721188 - MC09g1749 Mch9g2224 699106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2224 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 311 - -
Mch9g2224 860 CDD GT20_TPS 59 544 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Mch9g2224 860 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Mch9g2224 860 NCBIfam HAD-IIB family hydrolase 592 793 IPR006379 -
Mch9g2224 860 Gene3D Glycogen Phosphorylase B; 312 528 - -
Mch9g2224 860 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0005992(InterPro)
Mch9g2224 860 Gene3D Glycogen Phosphorylase B; 52 311 - -
Mch9g2224 860 SUPERFAMILY HAD-like 591 839 IPR036412 -
Mch9g2224 860 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Mch9g2224 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Mch9g2224 860 NCBIfam trehalose-phosphatase 589 838 IPR003337 GO:0005992(InterPro)
Mch9g2224 860 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 851 - -
Mch9g2224 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Mch9g2224 860 Gene3D - 719 847 IPR023214 -
Mch9g2224 860 Gene3D - 590 717 IPR023214 -
Mch9g2224 860 CDD HAD_TPP 592 833 - -
Mch9g2224 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 839 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0135 Mch-Chr4:891787 Mch9g2224 Mch-Chr9:22716852 0 dispersed
Mch9g1356 Mch-Chr9:15890577 Mch9g2224 Mch-Chr9:22716852 0 dispersed
Mch6g0163 Mch-Chr6:1098180 Mch9g2224 Mch-Chr9:22716852 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2224 K16055 - csv:101212688 1665.2