Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2225 CTGGTTATGGATCTGGAAAGTGGGGTGGTTAATGAGAAGAATGCGAAGAAAGACTCATGGAGGACGGTTTTGATGATGGCTTATCAGAGCCTTGGCGTTGTCTATGGGGAGTTGGGGACTTCGCCTCTGTATGTCTACAAGAACACTTTTGCTGATGAAGATATCGAGCACACCACCAGCAACGACGAGATTTACGGCGTTTTGTCCTTCGTTTTCTGGACTCTCACTATTGTTCCTCTGCTCAAGTACATATTTATCGTCCTTAAAGCCGATGACAATGGCGAGGGAGGGACGTTCGCTCTCTATTCGTTGCTGTGTCGACACGCCCGAGTTAGCTCATTGCCCAATACTCAGTTGGTTGACGCTGAACTCGCTGAGTACAAGATGGATATCCACGGTCCACCGCCTCAGGAAAGTTTTGGGTTCAAACTCAAATCTGCGTTGGAGAAGCGTCGGATTCTGCAGAAATTCTTGCTCGTTCTTGCTTTACTTGGGGCTTGCATGGTGATTGGGGATGGCATCCTGACACCGGCTATTTCTGTTTTTTCGGCGGTTTCTGGCCTCGAGCATACCATGTCGAAAGAGCATCACAAATATATAGAAGTCCCAATCACATGCATCATACTGATAGGCTTGTTTGCTCTTCAACACTACGGCACGCACAAGATAGGCTTCTTGTTTGCTCCCATAGTGACAGTTTGGCTATTGTGTATCAGTGCCACTGGCTTGTACAATATTATTCACTGGAATCCTGGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTCCAATTTCTTAAGAAAACACAAAAAGGAGGTTGGATGTCACTTGGTGGAATTATGTTGTGCATTACTGGTTCAGAGGCGATGTTTGCAGACCTTGGGCATTTCTCACAGCTATCAATTAAGATTGCTTTCACTTTTATGGTTTATCCATCTCTCCTCCTAGCATACATGGGACAAGCTGCCTATCTATCTCAAAATCATACCACTCCAAATGTAATTGGGTTTTATGTATCTGTACCTGAGAAATTGAGGTGGCCTGTCCTTATAATCGCTGTGCTTGCTGCAGTAGTAGGAAGCCAGGCTATAATCACCGGAACTTTCTCAATTATAAAGCAGTGCTCCGCTTTGGGTTGCTTTCCGCAAGTTAAAATTGTCCATACATCCTCGAAAGTTCACGGTCAGATTTATATCCCGGAGGTTAATTGGATTTTGATGCTGTTGTGCTTGGCTGTTACCATAGGTTTCAGAGACACAAAGCGCTTGGGTCATGCCTCAGGTCTGGCAGTGATAACCGTCATGCTGGTTACTACGTGCTTGATGTCTCTTGTTATCGTCCTGTGTTGGCATCGAAGCGTGTTTCTTGCAATAGGCTTCATCTTCTTCTTTGGCAGCATTGAATCTCTCTACTTCTCAGCTTCTCTCATCAAATTTCTTGAAGGAGCTTGGGTTCCCATCGCTATTTCTCTTGTCTTGCTGATTGTTATGTATGTCTGGCACTATGGTACTCTTAAGAAGTATGAATTTGACATCCAAAACAAGGTTTCTATCAACTGGCTGCTTAGTTTGGGTCCCAGCCTAGGCATCGTAAGGGTTCGTGGGATTGGTCTCATACAGACGGAGCTTGTTTCAGGAATCCCGGGTATCTTCACCCACTTCGTCACCAATATTCCTGCCTTCCATCAGGTTCTCGTTTTCCTTTGCATCAAACATGTCCCGGTGCCACGTGTTAGACCTGAGGAACGGTTTCTAATAGGTCGTATAGGTACGAGCGAATATAGACTCTATAGGTGCATTGTACGATATGGGTATCGAGATGTTCACAAAGACGACGTAGGGTTTGAGAATGATCTTATATGCAGCATAGCAGAGTTTATGAGGTCAGGGAATCCAGAGTCTAGTGATTCCAAACACGGTTTTGACAGAGATGGTGAAAATATGACAGTCGTCGGGACATCTTCTACCCATGAAGATAGAATTCAGATGGCTGAGAACAATAACGACGCAGACTCTGAAGAACTGTATGCAGCTTCAGACGCAAGGGAAATAAGGTCGCCAGCTCCAATTCAATTGAGGAAAAGAGTGCGTTTCATCGTACCCGAGAGCCCAAAGATCAACACCGATGCAATGGCAGAACTAGAAAATCTAATGGAAGCAAGGGAAGGAGGAGTAGCTTACATATTAGGACGGTCGCACATGAAAGCAAAACAAGGATCGAGCATGCTGAAAAGGGTGTCGATCGACTTCATTTACGAGTTCTTGAGGAAGAACAGCAGAGAAGCTAACTACCCTGTAGGTTCATCACATTCATCATCAACCCTTGAGGTGGGTATGATGTATCTTGTTTAG 2352 44.86 LVMDLESGVVNEKNAKKDSWRTVLMMAYQSLGVVYGELGTSPLYVYKNTFADEDIEHTTSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLVDAELAEYKMDIHGPPPQESFGFKLKSALEKRRILQKFLLVLALLGACMVIGDGILTPAISVFSAVSGLEHTMSKEHHKYIEVPITCIILIGLFALQHYGTHKIGFLFAPIVTVWLLCISATGLYNIIHWNPGVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTFMVYPSLLLAYMGQAAYLSQNHTTPNVIGFYVSVPEKLRWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPQVKIVHTSSKVHGQIYIPEVNWILMLLCLAVTIGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGSIESLYFSASLIKFLEGAWVPIAISLVLLIVMYVWHYGTLKKYEFDIQNKVSINWLLSLGPSLGIVRVRGIGLIQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKHVPVPRVRPEERFLIGRIGTSEYRLYRCIVRYGYRDVHKDDVGFENDLICSIAEFMRSGNPESSDSKHGFDRDGENMTVVGTSSTHEDRIQMAENNNDADSEELYAASDAREIRSPAPIQLRKRVRFIVPESPKINTDAMAELENLMEAREGGVAYILGRSHMKAKQGSSMLKRVSIDFIYEFLRKNSREANYPVGSSHSSSTLEVGMMYLV 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22729277 22734763 - MC09g1750 Mch9g2225 699107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2225 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 782 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch9g2225 783 NCBIfam potassium uptake protein 26 781 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch9g2225 783 Pfam K+ potassium transporter integral membrane domain 27 522 IPR053951 -
Mch9g2225 783 Pfam K+ potassium transporter C-terminal domain 540 779 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1541 Mch-Chr8:12004197 Mch9g2225 Mch-Chr9:22729277 0 dispersed
Mch9g0767 Mch-Chr9:5731931 Mch9g2225 Mch-Chr9:22729277 4.80E-189 dispersed
Mch9g1394 Mch-Chr9:16369844 Mch9g2225 Mch-Chr9:22729277 0 dispersed
Mch4g2231 Mch-Chr4:23901843 Mch9g2225 Mch-Chr9:22729277 0 wgd
Mch8g0003 Mch-Chr8:16589 Mch9g2225 Mch-Chr9:22729277 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2225 K03549 - csv:101212925 1395.18