Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2244 CCTTCTTCCTCACCGCCCTCTCCCTCAGACTCTAGCTCTACACCGCCCGCCGATGACGTCTCCAATATGATTGGCTCGTCTCAGGCAAAGGTGTCACCACCGCCGGTTGACGCTTCACCGCCGCCATCTCCTCCTCCTCCTCCTCCTCGTTCGCCACTGCCTTCACCACCGCCTCCAAAAGAGTCGTCCGATGGTGGTGACGCAGCAGACGCAGACCCGGCCACAGGCACGAGCACAACCACAACCACAACCACACCCACACCCACTCTTACTCCAAACAACCCATCTCCTTCCTCCGACTCAAAACCATTGAAATCGTCAACAGGGGAGCCCCATACACCACCCTCGGGTTCATCTGGTAACACTCAAGTTGCGGTAGGTGCTGCAATAGCTGGAGTTTTGTTAATTATTTTGGTTGCCGTGCTTTTTGTTTTCTCAAGGAAGAAGAAAAGACGGGGAGATTTATATCCCGGCCCCTACATGCCTCCTAACAACTTCTGTGTGAAATCAGATGGAAATTACTATCCCCATCAACATATGGGCAACTCTGGTTCGCCAGAAGGCTTCTATACTCAGGTACCGCATACTCCTGTTGGAAACAGCTTTGGGAGTCAAAAAGGAACCGTATACAGTGGCAGTGGAGTGGAGTCGGGGGTTATAAGCACCGCTAAGTTCTTCTTCAGCTATGAGGAGTTGATGGAAATTACGTTTGGATTTTCGCGTCAAAACATTCTTGGGGAAGGTGGGTTTGGATGTGTTTTCAAGGGTTGGCTTCCAGAAGGGAAGCCAGTGGCTGTGAAGCAACTCAAGGCAGGAAGTGGACAGGGGGAGAGGGAATTCAAGGCCGAAGTCGAGATTATCAGTCGTGTTCATCATCGACATTTGGTGTCTTTAGTGGGCTACTGCGTCTCAGAGAATCATAGATTGCTCATCTATGAGTTTGTTCCTAATATGACTCTTGAGCATCATCTCCATAGCAGTAAAGGAGTCCCTGTGTTGGATTGGTCTAAAAGACTCAAAATTGCTTTGGGAGCTGCAAAGGGTTTGGCATATCTGCATGAGGATTGTCATCCCAAGATTATCCACAGAGACATCAAGTCAGCCAACATTTTACTGGATGATGCTTTTGAGGCACAGGTTGCAGATTTTGGACTTGCGAAACTGACGAATGATACACACACCCACGTATCGACTCGTGTCATGGGGACATTTGGATACATGGCACCTGAATACGCATCAAGTGGGAAATTGACAGACAGATCAGATGTATTCTCGTTTGGGGTTGTGCTTCTTGAGCTTATTACTGGTCGTAAGCCTGTTGATCCTTCTCAACCTTTGGGGGATGAGAGTTTGGTCGAATGGGCTCGTCCACACCTCATACGTGCCCTTGAAACTGGGGAGTTCGGCGAATTGACAGATCCACGACTTGAAAAACATTACGTGGAAAGTGAAATGTTCAGAATGATCGAAGCAGCAGCTGCCTGCGTTCGTCATTCGGCTCCCAAACGGCCTCGCATGGTTCAGGTGGTGAGGGCACTAGATACTGAAAGTGACATGTCCGACCTCTCCAATGGTGTCAAATTTGGCCAGAGTACCATCTATGATTCTGGACAATACAGTCAAGACATTTCTAGATTCAGGAGAATGGCACTCGGTGGAGACAGCTCCGAATTCGACGTTTATAGTAGCGAATACAATTCAAGAGAAATGACTGCAAGTCAAGAATCATGGAGATACCAAGATAACTCAAGTGGTGAACAAGAAACTCGAGCCTTTAAAGGACAAAGTAGCACACCACAAAGTCACTTCGGCAGTCGACAATTCTAA 1827 48.39 PSSSPPSPSDSSSTPPADDVSNMIGSSQAKVSPPPVDASPPPSPPPPPPRSPLPSPPPPKESSDGGDAADADPATGTSTTTTTTTPTPTLTPNNPSPSSDSKPLKSSTGEPHTPPSGSSGNTQVAVGAAIAGVLLIILVAVLFVFSRKKKRRGDLYPGPYMPPNNFCVKSDGNYYPHQHMGNSGSPEGFYTQVPHTPVGNSFGSQKGTVYSGSGVESGVISTAKFFFSYEELMEITFGFSRQNILGEGGFGCVFKGWLPEGKPVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCVSENHRLLIYEFVPNMTLEHHLHSSKGVPVLDWSKRLKIALGAAKGLAYLHEDCHPKIIHRDIKSANILLDDAFEAQVADFGLAKLTNDTHTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDPSQPLGDESLVEWARPHLIRALETGEFGELTDPRLEKHYVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDTESDMSDLSNGVKFGQSTIYDSGQYSQDISRFRRMALGGDSSEFDVYSSEYNSREMTASQESWRYQDNSSGEQETRAFKGQSSTPQSHFGSRQF 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22849797 22853273 + MC09g1766 Mch9g2244 699126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2244 608 CDD STKc_IRAK 245 514 - -
Mch9g2244 608 SUPERFAMILY Protein kinase-like (PK-like) 219 513 IPR011009 -
Mch9g2244 608 FunFam proline-rich receptor-like protein kinase PERK8 315 528 - -
Mch9g2244 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g2244 608 MobiDBLite consensus disorder prediction 34 61 - -
Mch9g2244 608 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 89 549 IPR047117 -
Mch9g2244 608 ProSiteProfiles Protein kinase domain profile. 239 519 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2244 608 Pfam Protein tyrosine and serine/threonine kinase 242 512 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g2244 608 Gene3D Phosphorylase Kinase; domain 1 205 314 - -
Mch9g2244 608 MobiDBLite consensus disorder prediction 1 121 - -
Mch9g2244 608 ProSitePatterns Protein kinases ATP-binding region signature. 245 267 IPR017441 GO:0005524(InterPro)
Mch9g2244 608 FunFam Proline-rich receptor-like protein kinase PERK8 212 314 - -
Mch9g2244 608 MobiDBLite consensus disorder prediction 13 33 - -
Mch9g2244 608 MobiDBLite consensus disorder prediction 570 608 - -
Mch9g2244 608 SMART serkin_6 239 513 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2244 608 MobiDBLite consensus disorder prediction 73 121 - -
Mch9g2244 608 Gene3D Transferase(Phosphotransferase) domain 1 315 530 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0807 Mch-Chr6:5618986 Mch9g2244 Mch-Chr9:22849797 1.81E-156 dispersed
Mch8g3147 Mch-Chr8:33763076 Mch9g2244 Mch-Chr9:22849797 5.71E-155 dispersed
Mch9g2017 Mch-Chr9:21439862 Mch9g2244 Mch-Chr9:22849797 2.29E-157 dispersed
Mch9g2244 Mch-Chr9:22849797 Mch7g0042 Mch-Chr7:375400 5.47E-83 dispersed
Mch9g2244 Mch-Chr9:22849797 Mch4g2421 Mch-Chr4:25193825 4.73E-169 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77722 PF07714 PK_Tyr_Ser-Thr 5.10E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2244 - - - 0.0