Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2261 ATGTATCCCTCCAATTTCAATTTCCCCTCTTCGATCGCATTGCTTCTGCTGCTCTTCTTTTGTCTTGTAAGTCATTCGGCGGCTGATCCGAGAGCCACGGAGGCGGCTCTCATATGTTCCAACAACACGGCTTCCCCGCCGGAGCGATCCACCTTCGTGACGAATTTCTTGGCGTCCATGGATGCGGTTACTCCTCTAATTGCTGCGCAGCGATTTGCGACTGTCGTGAATGGGACTGGAAACACGACCGTTTACGCTTTTGGTGAGTGTATGAACGATCTCTCCCAGTCGGACTGCGATCTCTGCTTTGCTTCGATGAAAACTCAGATCCTGCGGTGTCTCCCCTTCCAACTTGCTACTCGCGGGGGAAGGCTATTCTTCGATGGCTGTTATGTTAGGTATGATTATTATAATTTCTTCAACGAATCTTTGAGTGCAGTGGATAGGGCTGTATGTGGGAAGTCGGATTATAGTGGGAATCAGACCATTTTTAGTGCTAATGCTATGGAATTGGCGAGGAATTTGAGTGTAGTAGCGCCCAAGAACGACGGGTTTGCGGTTGGATTGGTGAATCTGAGAAATGTTTCCGTCTTTGGATTGGGTCAGTGTTGGAAATTTGTGAGAGGGGCTTCTTGTTCGAAGTGTTTGGTTGCTGCTGCTAAGGAAATAGGTTCGTGTCCTCCAAAAGCTGAAGGAAGGGCGTTAAATGCTGGCTGTTACTTCAGATTTTCAACTCAACGATTTTATTTCAACAGCACGGCAACTGCCACTGGAGGCAATGGAAGGAGCCGTTTGGCAATAATTTTGGCTTCAGTTTCTGCTGCCGTGGCTGCCGTGTTGATTATTGCAACGGTTGTTTTCTGTGCCAGAAGGAATGTTGTGAGGAAACGCAAAGAGAGAAAGCAACTCGGTCCTCTTCTAGCTATCGTTAACAAGTCCAAACTTAATTTTTCATACGAGACTCTTGAGAGGGCCACAAATTACTTTGACCAGTCCAATAAACTGGGACAAGGAGGTTCTGGTTCAGTTTATAAAGGAACTCTATCAGATGGAAGAGTTGTAGCAATCAAGAGGCTTTTCTTCAATACAAGACAATGGGTGGATCATTTCTTTAATGAAGTGAATTTGATAAGTGGCATTCGACACAAAAATCTTGTTGGGCTGTTGGGATGCAGTATTACAGGCCCGGAAAGCCTTCTTGTTTATGAATATGTGCCAAATCAAAGCCTGCATGATTACCTTTTTGGTAACAAGAATGTCCAGCCACTGAGTTGGGAATCCAGGTTTAAGATTGTATTAGGCACAGCTGAAGGCTTGGCTTATCTTCACGAGGAGTCAAAGGTGAAAATCATTCATCGAGACATAAAATTAAGCAATATTCTGCTGGACAATGATTTCACTCCGAAGATTGCTGATTTTGGGCTCGCTAGATTGCTTCCTGAAGATAAGACACACATTAGCACTGCAATTGCTGGCACGCTAGGTTACATGGCTCCAGAATATGTAGTGCGTGGCAAGTTGTCTGAAAAGGCAGATGTTTATAGTTTTGGAGTTTTTGCCATTGAAGTTATCACAGGAAGGAGGAATGGTCACTTCTATCAAGATGCAACCTCCATCTTACAAAGGGTCTGGAATTTTTATGGAGAGGGTAAGCTATATGCAGCTGTTGATCCTGTTCTTGCAGGCAACTTTCCACGAGATGCAGCATCTCAAATGCTTCAAATAGGTCTGGTTTGTGTGCAAGCCTTTGCTGATCTAAGGCCATCTATGTCGATGGTTGTGAAAATGATTACAGAAAATTATGAGATTCCCCAGCCAAAGCAACCTCCATATCTTCATTCTTCAAGTGGAGAAGTAAAATTCCAGAATTCTTCAGGGTCATCCAAACCCATTCTGGATTTGAATTCAGGGTCTTCACAAACTAACATGACTCAAAGCATCATCGATCCTAGATGA 1956 44.17 MYPSNFNFPSSIALLLLLFFCLVSHSAADPRATEAALICSNNTASPPERSTFVTNFLASMDAVTPLIAAQRFATVVNGTGNTTVYAFGECMNDLSQSDCDLCFASMKTQILRCLPFQLATRGGRLFFDGCYVRYDYYNFFNESLSAVDRAVCGKSDYSGNQTIFSANAMELARNLSVVAPKNDGFAVGLVNLRNVSVFGLGQCWKFVRGASCSKCLVAAAKEIGSCPPKAEGRALNAGCYFRFSTQRFYFNSTATATGGNGRSRLAIILASVSAAVAAVLIIATVVFCARRNVVRKRKERKQLGPLLAIVNKSKLNFSYETLERATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAIKRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLFGNKNVQPLSWESRFKIVLGTAEGLAYLHEESKVKIIHRDIKLSNILLDNDFTPKIADFGLARLLPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADVYSFGVFAIEVITGRRNGHFYQDATSILQRVWNFYGEGKLYAAVDPVLAGNFPRDAASQMLQIGLVCVQAFADLRPSMSMVVKMITENYEIPQPKQPPYLHSSSGEVKFQNSSGSSKPILDLNSGSSQTNMTQSIIDPR 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22937256 22944228 - MC09g1782 Mch9g2261 699143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2261 651 Gene3D - 146 248 IPR038408 -
Mch9g2261 651 Gene3D - 33 139 IPR038408 -
Mch9g2261 651 CDD STKc_IRAK 335 599 - -
Mch9g2261 651 FunFam Cysteine-rich receptor-like protein kinase 2 405 605 - -
Mch9g2261 651 FunFam Cysteine-rich receptor-like protein kinase 2 295 404 - -
Mch9g2261 651 Gene3D Phosphorylase Kinase; domain 1 289 404 - -
Mch9g2261 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g2261 651 ProSiteProfiles Gnk2-homologous domain profile. 145 248 IPR002902 -
Mch9g2261 651 MobiDBLite consensus disorder prediction 609 651 - -
Mch9g2261 651 Pfam Protein kinase domain 330 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2261 651 FunFam Cysteine-rich receptor-like protein kinase 3 148 248 - -
Mch9g2261 651 ProSiteProfiles Protein kinase domain profile. 329 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2261 651 MobiDBLite consensus disorder prediction 607 651 - -
Mch9g2261 651 Pfam Salt stress response/antifungal 152 245 IPR002902 -
Mch9g2261 651 Pfam Salt stress response/antifungal 39 136 IPR002902 -
Mch9g2261 651 SUPERFAMILY Protein kinase-like (PK-like) 315 619 IPR011009 -
Mch9g2261 651 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Mch9g2261 651 FunFam Cysteine-rich receptor-like protein kinase 2 32 139 - -
Mch9g2261 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 174 627 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Mch9g2261 651 Gene3D Transferase(Phosphotransferase) domain 1 405 608 - -
Mch9g2261 651 SMART serkin_6 329 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2261 651 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1491 Mch-Chr6:14394492 Mch9g2261 Mch-Chr9:22937256 2.83E-55 dispersed
Mch8g0038 Mch-Chr8:233794 Mch9g2261 Mch-Chr9:22937256 7.44E-135 dispersed
Mch8g1491 Mch-Chr8:11300880 Mch9g2261 Mch-Chr9:22937256 9.81E-183 dispersed
Mch9g1305 Mch-Chr9:15283138 Mch9g2261 Mch-Chr9:22937256 3.22E-85 dispersed
Mch9g2261 Mch-Chr9:22937256 Mch3g1187 Mch-Chr3:15081308 8.70E-75 dispersed
Mch9g2261 Mch-Chr9:22937256 Mch1g1792 Mch-Chr1:18195671 1.30E-94 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77723 PF00069 Pkinase 2.70E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2261 - - - 0.0