Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g2263 | ATGGAGGTCGACGGCGGCGCAGTGGAGTCTCAGCCGAGAAAATTCTCTCTTCCGGTGGACTCTGAAAATAAATCCACTAAGTTCAATATCTTTTCCGTCGCCGCGCCCCACATGCGAGCATTCCATCTCTCGTGGATTTCTTTCTGCGCGTGCTTCATCTCCAGTTTCGCGGCGGCGCCACTCCTCCCGGTGATCCGCGACAACCTTAACCTCACCGACACGGACATTGGCAACGCCGGAATCGCCTCCGTCTCCGGCGCCGTATTCGCCCGAATCATGATGGGCTCCGCCTGCGATTTGGTCGGACCGCGGCTTGCCTCCGCCACCCTCATCCTCGTCACTTCCCCGGCGGTTTATTTAACCTCAATAGCCTCATCCCCTGCTTCGTTCTTCCTCGCCCGGTTCTTCACCGGCTTCTCCCTCGCCACATTCGTCTCCACCCAATTCTGGATGAGCTCCATGTTCTCCGCCACCGTCGTCGGCACCGCCAACGGCGTCGCCGGCGGCTGGGGGAACATGGGCGGCGGCGCGACGCAGCTAATCATGCCGTACGTCTTCGCAATCATCGAGCACATGGGTGCCACCAAATTCACCGCGTGGAGAATCGCGTTCTTCATCCCGGCTCTGTTCCAGACCCTCTCGGCCTTCGCGGTGCTAATACTCGGCGAGGACACCCCCAACGGCAACTTCCGGCGCTTGCAGAAATCCGGCGACAAGGCGAAAGACAAATTCTCGAAGGTGATTTACCACGGAGCGACGAATTACAGAGGGTGGATTTTGGCTTTAACTTACGGGTACTGCTTCGGGGTGGAGTTGACGATTGATAACATAATCGCGAACTATTTCTATGATCGGTTCCATCTGAACCTGCACACGGCGGGGATTGTGGCGGCGAGTTTTGGGCTGGCGAATTTGTTTTCTCGGCCGTATGGTGGGATTTTGTCGGACGTGATGGCGAGGAGGTACGGGATGAGGGGGCGGCTGTGGGCGCTGTGGGTGGTGCAGACTTTGGGGGGCGTTTTGTGCGTGATTCTTGGGTTGGTTGGTTCTTTGGGCGTCTCGATTGCGGTTATGATGGTCTTCTCTGTGTTTGTTCAAGCTGCCTGTGGCCTTACTTTTGGCGTCGTTCCTTTCGTCTCTCGCAGGTCATTGGGGGTGATATCTGGGATGACGGGAGGGGGAGGAAACGTGGGGTCTGTGTTGACTCAGCTGATATTCTTCAGAGGGTCTCGCTACACAAAAGAGAGAGGCATCAGTCTGATGGGAGTGATGATCATCGCCTGCACAATCCCTCTTCTGTTCATCTATTTCCCTCAGTGGGGCGGCATGGTGTGCGGCCCCTCCTCCTCCAAGATTGCTTCCGAGGAGGATTACTATTTGTCCGAGTGGAGCCCTGAGGAGAAGGCCAAAGGCCACCATTTGCTCAGCCTTAAGTTCGCTCACAACAGTCGCACTGAGAGAGGCAAAACCCATAACTCCACTGCTGCTGCTGATCATGCAATTGCAGATCCTCCCCATGTCTAA | 1524 | 56.36 | MEVDGGAVESQPRKFSLPVDSENKSTKFNIFSVAAPHMRAFHLSWISFCACFISSFAAAPLLPVIRDNLNLTDTDIGNAGIASVSGAVFARIMMGSACDLVGPRLASATLILVTSPAVYLTSIASSPASFFLARFFTGFSLATFVSTQFWMSSMFSATVVGTANGVAGGWGNMGGGATQLIMPYVFAIIEHMGATKFTAWRIAFFIPALFQTLSAFAVLILGEDTPNGNFRRLQKSGDKAKDKFSKVIYHGATNYRGWILALTYGYCFGVELTIDNIIANYFYDRFHLNLHTAGIVAASFGLANLFSRPYGGILSDVMARRYGMRGRLWALWVVQTLGGVLCVILGLVGSLGVSIAVMMVFSVFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGSVLTQLIFFRGSRYTKERGISLMGVMIIACTIPLLFIYFPQWGGMVCGPSSSKIASEEDYYLSEWSPEEKAKGHHLLSLKFAHNSRTERGKTHNSTAAADHAIADPPHV | 507 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 22953763 | 22956793 | - | MC09g_new0480 | Mch9g2263 | 699145 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g2263 | 507 | FunFam | High affinity nitrate transporter 2.5 | 33 | 229 | - | - | |
Mch9g2263 | 507 | Pfam | Major Facilitator Superfamily | 45 | 401 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
Mch9g2263 | 507 | Gene3D | MFS general substrate transporter like domains | 34 | 230 | IPR036259 | - | |
Mch9g2263 | 507 | SUPERFAMILY | MFS general substrate transporter | 35 | 437 | IPR036259 | - | |
Mch9g2263 | 507 | PANTHER | HIGH-AFFINITY NITRATE TRANSPORTER 2.3 | 10 | 489 | IPR044772 | GO:0005886(PANTHER)|GO:0015112(InterPro)|GO:0015112(PANTHER)|GO:0015706(PANTHER)|GO:0071249(PANTHER) | |
Mch9g2263 | 507 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 28 | 440 | IPR020846 | GO:0022857(InterPro) | |
Mch9g2263 | 507 | Gene3D | MFS general substrate transporter like domains | 239 | 441 | IPR036259 | - | |
Mch9g2263 | 507 | MobiDBLite | consensus disorder prediction | 484 | 507 | - | - | |
Mch9g2263 | 507 | CDD | MFS_NRT2_like | 41 | 434 | IPR044772 | GO:0015112(InterPro) | |
Mch9g2263 | 507 | FunFam | Nitrate transporter 2.1 | 241 | 442 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch3g0556 | Mch-Chr3:9732734 | Mch9g2263 | Mch-Chr9:22953763 | 2.04E-212 | dispersed | |
Mch3g0557 | Mch-Chr3:9741393 | Mch9g2263 | Mch-Chr9:22953763 | 2.04E-212 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch9g2263 | K02575 | - | csv:101212365 | 797.734 |