Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2302 ATGGCAGAGCTGATTAGGAATCCACGGGTAATGAAGAAGCTACAATATGAGATTAGAAGTTGCATAAAAGAAGATCAAGTGAAGGAGAGCGACCTGGAAAAGCTTCAATATCTAAGAATGGTAGTGAAGGAGGTTTTGAGGTTGCATGCGCCTGCCCCACTTCTCCTTCCAAGAGAAACCATGTCTCATTTCAAGCTCAATGGTTACGATATTGCTCCAATGGTTCATCTTCATGTCAACGTTTGGGCGATCGGACGAGACCCGGATTCTTGGAGTAACCCAGAAGAGTTCTTGCCAGAGAGATTTATGGAAAGCTGTGTGGATTTCAGAGGGCAGAATTTTGAGTTATTACCGTTTGGAGCTGGTCGGAGGAGCTGTCCTGGTGTGAACATGGGGGCCATTACGGTGGAGTTGATATTGGCTAATCTGTTACTTTGTTTTGATTGGAAATTGCCTGATGGAATGAAAGAAGATGTGGACATGGAAGAGGATGCTGGTCTAACAGTTGCAAAGAAATCACCTCTTAAACTTGTTCCAGTCTGCTACGGATTTGGCTCCACTCATGATCATGAATGCCAAGTACCATGA 588 44.39 MAELIRNPRVMKKLQYEIRSCIKEDQVKESDLEKLQYLRMVVKEVLRLHAPAPLLLPRETMSHFKLNGYDIAPMVHLHVNVWAIGRDPDSWSNPEEFLPERFMESCVDFRGQNFELLPFGAGRRSCPGVNMGAITVELILANLLLCFDWKLPDGMKEDVDMEEDAGLTVAKKSPLKLVPVCYGFGSTHDHECQVP 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23219835 23223645 - MC09g_new0486 Mch9g2302 699184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2302 195 Pfam Cytochrome P450 2 171 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2302 195 SUPERFAMILY Cytochrome P450 1 179 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2302 195 PRINTS E-class P450 group I signature 116 126 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2302 195 PRINTS E-class P450 group I signature 126 149 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2302 195 PRINTS E-class P450 group I signature 80 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2302 195 PRINTS E-class P450 group I signature 39 57 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2302 195 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 119 128 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch9g2302 195 PANTHER CYTOCHROME P450 71B11-RELATED 1 179 IPR050193 -
Mch9g2302 195 FunFam Predicted protein 1 177 - -
Mch9g2302 195 Gene3D Cytochrome P450 1 181 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2302 195 PRINTS P450 superfamily signature 40 51 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2302 195 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2302 195 PRINTS P450 superfamily signature 117 126 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g2302 Mch-Chr9:23219835 Mch9g2308 Mch-Chr9:23238485 3.64E-100 dispersed
Mch9g2302 Mch-Chr9:23219835 Mch9g2304 Mch-Chr9:23226720 9.85E-99 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2302 - - - 0.0