Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g2304 | ATGCATAGCCTTGATCAGTTGATCATGCACACCATTTTCTTGGTCTTTGCCATTCCCCTAATCTTTCTCCTCCTCCTCAAAACAAAGACAAAATTTTCAACACAGAAAAATAAGAACCAACTTCCACCAAGCCCTCCAAAGCTCCCTTTGTTGGGTCACTTGCACCTCATCGGCTCCCTCCCCCATCGCTCCTTATGGAAGCTTTCAACAAAATACGGCCCCGTCATGCGCCTCCACCTCGGCTCCGTCCCGACCATCGTAATCTCCTCCGCCGCTGCCGCCCGAGACCTGTTTAAGCTCCACGACCTCGCGTCTTGCAGCCGCCCTCCCTTATCCGGCAGCGGAAGATTGTCCTACAATTTCCTCGACATAAGTTTCTCCCCGTATGGCGACCACTGGAGGGAGGTTCGAAAAATCTGCGTGCTTGAGCTGTTCAGCGTCAGGCGGGTGCAGTCGTTTCGGGGGGTTAGAGAACATGAGGTGGGTCTGCTTATAAACTCCATCGCTCAATCCTCAACCGCCGGAGCTCCGGTGGACGTGAGTGAGAAATCGTATTGTCTGACGGCGAGTATAATTACGCGGGTTGCTTTTGGGAAGAGCTTCAGAGGGGGTGAATTAGATAATGAGAAATTTGAAGAGGTTATCCGTAGAGGTTTGGTGGTAGTGGGAAGCTTCTCGGCGACTGACTTCTTCCCAAGCTTTGGTTGGATTATTGATTGGATGAATGGAGTTCGTGGGAGGTTGGAGAAGAGTTTTTCGGAGTTGGATTCTTTTTTTCAACATGTAATTGACCACCGCCTCAAATTTGGGGCGACTTGTGATGATGACAACAATATTTTGGATGTGTTGTTGAAGATGGAGAGAGAGCGCTCTGAATTTGATGCTCTGCAACTCTCTAGAGATTGCATCAAGGCACTTACCATGGATATATTTCTAGCTGGAGTGGACACGGGAGCCGGAACAATTGTTTGGGCGATGGCAGAGCTGATTAAGAATCCAAGGGTTATGAAAAAGCTACAAGACGAGATCAGAAGCTCCATAAAAGAAGAAGATGGAATAGTGAAGGAGAGCCACCTCGAAAAACTCGAATATCTAAAAATGGTGGTCAAAGAAGTTCTGAGGCTTCATCCCCCGGGCCCACTCCTCCTTCCAAGAGAAACAATGTCCCATTTCAAGCTCGGCGGCTACGACATCGAACCCAAAGCCCATCTCCACGTCAATGTTTGGGCCATCGGGCGGGACCCGGAATCGTGGACCGACCCGGATGAGTTCCTGCCGGAGAGATTCGTGGGAAGCAACATCGATTTCAGAGGGCAGAATTTTGAGCTGTTGCCGTTCGGAGCTGGCCGGAGGAGCTGCCCGGGGATGCACATGGCCACCGTTGCGGTGGAGCTGGCGCTGGCTAATATGCTGCTGTGCTTTGATTGGAAATTGCCGCAAGGGATGAAAGAAGAAGATTTGGACGTGGAAGAGGATGCTGGTCTGACGGTCACCAAGAAATCGCCTCTTCATCTTATTCCTGTCGAATACTTCAAATAA | 1539 | 50.16 | MHSLDQLIMHTIFLVFAIPLIFLLLLKTKTKFSTQKNKNQLPPSPPKLPLLGHLHLIGSLPHRSLWKLSTKYGPVMRLHLGSVPTIVISSAAAARDLFKLHDLASCSRPPLSGSGRLSYNFLDISFSPYGDHWREVRKICVLELFSVRRVQSFRGVREHEVGLLINSIAQSSTAGAPVDVSEKSYCLTASIITRVAFGKSFRGGELDNEKFEEVIRRGLVVVGSFSATDFFPSFGWIIDWMNGVRGRLEKSFSELDSFFQHVIDHRLKFGATCDDDNNILDVLLKMERERSEFDALQLSRDCIKALTMDIFLAGVDTGAGTIVWAMAELIKNPRVMKKLQDEIRSSIKEEDGIVKESHLEKLEYLKMVVKEVLRLHPPGPLLLPRETMSHFKLGGYDIEPKAHLHVNVWAIGRDPESWTDPDEFLPERFVGSNIDFRGQNFELLPFGAGRRSCPGMHMATVAVELALANMLLCFDWKLPQGMKEEDLDVEEDAGLTVTKKSPLHLIPVEYFK | 512 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 23226720 | 23228960 | - | MC09g_new0487 | Mch9g2304 | 699186 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g2304 | 512 | CDD | CYP71-like | 71 | 503 | - | - | |
| Mch9g2304 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 446 | 455 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch9g2304 | 512 | Gene3D | Cytochrome P450 | 27 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | Pfam | Cytochrome P450 | 42 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | E-class P450 group I signature | 187 | 205 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | E-class P450 group I signature | 407 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | E-class P450 group I signature | 453 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | E-class P450 group I signature | 443 | 453 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | P450 superfamily signature | 453 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | P450 superfamily signature | 444 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | PANTHER | CYTOCHROME P450 71B11-RELATED | 20 | 508 | IPR050193 | - | |
| Mch9g2304 | 512 | SUPERFAMILY | Cytochrome P450 | 42 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2304 | 512 | FunFam | Cytochrome P450 83B1 | 28 | 506 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g0110 | Mch-Chr6:645144 | Mch9g2304 | Mch-Chr9:23226720 | 6.16E-134 | dispersed | |
| Mch9g2304 | Mch-Chr9:23226720 | Mch9g2307 | Mch-Chr9:23233550 | 0 | dispersed | |
| Mch9g2302 | Mch-Chr9:23219835 | Mch9g2304 | Mch-Chr9:23226720 | 9.85E-99 | proximal | |
| Mch9g2304 | Mch-Chr9:23226720 | Mch9g2305 | Mch-Chr9:23231232 | 3.02E-31 | tandem | |
| Mch5g1667 | Mch-Chr5:17467804 | Mch9g2304 | Mch-Chr9:23226720 | 4.20E-96 | transposed | |
| Mch3g1408 | Mch-Chr3:16565586 | Mch9g2304 | Mch-Chr9:23226720 | 9.93E-42 | wgd | |
| Mch6g0109 | Mch-Chr6:641193 | Mch9g2304 | Mch-Chr9:23226720 | 2.29E-57 | wgd |
Pathway information