Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g2307 | ATGCATAGCCTTGATCAATTGATGCACACCATTTTGTTGACCTTGGCCATTCCCCTGTTCTTGCTCCTCCTCCTCAAAACAAAGACAAAATTTTCAACACAGAAAAATAAGAACCAACTTCCTCCAAGCCCTCCAAAGCTCCCTTTGTTGGGCCACTTGCATCTCATCGGCTCCCTCCCCCATCGCTCCTTATGGAAGCTTTCAACAAAATACGGCCCCGTCATGCGCCTCCACCTCGGCTCCGTCCCGACCATCATAATCTCCTCCGCCGCTGCCGCACGAGACATGTTTAAGCTCCACGACCTCGCTTCTTGCAGCCGCCCTCCCTTATCCGGCAGCGGAAGATTGTCGTACAATTTCCTCGACATAAGTTTCTCCCCATACGGCGACCACTGGAGGGAGGTTCGAAAAATCTGCGTGCTTGAGCTGTTCAGCGTCAGGCGGGTGCAGTCGTTTCGGGGGGTCAGAGAACAAGAGGTGGGTCTGCTTATAAACTCCATCGCTCAATCCTCAACTTCCGGAGCTCTGGTGGATGTGAGCGAAAAATCGTATTCTCTGACCGCGAGTATAATTACGCGGGTTGCTTTTGGGAAGAGCTTCAGAGGGGGTGAATTAGATAATGAGAAGTTTGAAGAGGTTATCCGTAGAGCTTTGGTGGTAATGGGAAGCTTCTCGGCGACTGACTTTTTCCCAAGTTTTGGTTGGATTATTGATTGGATGAGTGGCGTTCGTGGGAGGTTGGAGAAGAGTTTTTTGGAGTTGGATTCTTTTTTTCAACATGTAATTGACCACCGCCTCAAATTTGGGGCGACTTGTGATGATGACAACAATATTTTGGATGTGTTGTTGAAGATGGAGAGAGAGCGCTCTGAATTTGATGCTCTGCAACTCACTAGAGACTGCATCAAGGCACTTACCATGGATATATTTATAGCCGGAGTGGACACGGGAGCCGGAACAATTGTTTGGGCCATGACAGAGCTGGCGAGGAATCCAAGGGTTATGAAAAAGCTACAAGACGAGATCCGAAGCTCCATAAAAGAAGAAGATCGAGTAGTGAAGGAGAGCCACCTCGAAAAGCTTGAATATCTAAAAATGGTGGTCAAAGAAGTTCTGAGGCTTCATCCGCCGGCCCCACTTCTCCTTCCACGAGAAACAATGTCCCATTTCAAGCTCGGCGGCTACGACATCGAACCCAAAGCCCATCTCCACGTCAATATTTGGGCCATCGGGCGGGACCCGGAATCGTGGACAGACCCGGATGAGTTCCTGCCGGAGAGATTCGTGGGAAGCAACATCGATTTCAGAGGGCAGAATTTTGAGCTGTTACCGTTCGGAGCTGGCCGGAGGAGCTGCCCGGGGATGCACATGGCCACCGTTGCGGTGGAGCTGGCGCTGGCTAATATGCTGCTGTGCTTTGATTGGAAATTGCCGCAAGGGATGAAAGAAGAAGATTTGGACATGGAAGAGGATGCTGGTCTGACGGTCACCAAGAAATCGCCTCTTCATCTTATTCCTGTCGAATACTTCAAATAA | 1536 | 49.93 | MHSLDQLMHTILLTLAIPLFLLLLLKTKTKFSTQKNKNQLPPSPPKLPLLGHLHLIGSLPHRSLWKLSTKYGPVMRLHLGSVPTIIISSAAAARDMFKLHDLASCSRPPLSGSGRLSYNFLDISFSPYGDHWREVRKICVLELFSVRRVQSFRGVREQEVGLLINSIAQSSTSGALVDVSEKSYSLTASIITRVAFGKSFRGGELDNEKFEEVIRRALVVMGSFSATDFFPSFGWIIDWMSGVRGRLEKSFLELDSFFQHVIDHRLKFGATCDDDNNILDVLLKMERERSEFDALQLTRDCIKALTMDIFIAGVDTGAGTIVWAMTELARNPRVMKKLQDEIRSSIKEEDRVVKESHLEKLEYLKMVVKEVLRLHPPAPLLLPRETMSHFKLGGYDIEPKAHLHVNIWAIGRDPESWTDPDEFLPERFVGSNIDFRGQNFELLPFGAGRRSCPGMHMATVAVELALANMLLCFDWKLPQGMKEEDLDMEEDAGLTVTKKSPLHLIPVEYFK | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 23233550 | 23236048 | - | MC09g_new0490 | Mch9g2307 | 699189 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g2307 | 511 | Gene3D | Cytochrome P450 | 26 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | P450 superfamily signature | 452 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | FunFam | Cytochrome P450 83B1 | 27 | 505 | - | - | |
| Mch9g2307 | 511 | Pfam | Cytochrome P450 | 41 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | CDD | CYP71-like | 70 | 502 | - | - | |
| Mch9g2307 | 511 | PANTHER | CYTOCHROME P450 71B11-RELATED | 19 | 507 | IPR050193 | - | |
| Mch9g2307 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 445 | 454 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch9g2307 | 511 | SUPERFAMILY | Cytochrome P450 | 41 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | E-class P450 group I signature | 452 | 475 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | E-class P450 group I signature | 186 | 204 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | E-class P450 group I signature | 442 | 452 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2307 | 511 | Coils | Coil | 335 | 355 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch3g1407 | Mch-Chr3:16559625 | Mch9g2307 | Mch-Chr9:23233550 | 1.80E-138 | dispersed | |
| Mch6g0108 | Mch-Chr6:639045 | Mch9g2307 | Mch-Chr9:23233550 | 1.40E-12 | dispersed | |
| Mch9g0532 | Mch-Chr9:3921555 | Mch9g2307 | Mch-Chr9:23233550 | 8.26E-89 | dispersed | |
| Mch9g2304 | Mch-Chr9:23226720 | Mch9g2307 | Mch-Chr9:23233550 | 0 | dispersed | |
| Mch9g2307 | Mch-Chr9:23233550 | Mch9g2309 | Mch-Chr9:23243370 | 1.19E-257 | dispersed | |
| Mch9g2307 | Mch-Chr9:23233550 | Mch9g2308 | Mch-Chr9:23238485 | 3.23E-248 | tandem |
Pathway information