Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2307 ATGCATAGCCTTGATCAATTGATGCACACCATTTTGTTGACCTTGGCCATTCCCCTGTTCTTGCTCCTCCTCCTCAAAACAAAGACAAAATTTTCAACACAGAAAAATAAGAACCAACTTCCTCCAAGCCCTCCAAAGCTCCCTTTGTTGGGCCACTTGCATCTCATCGGCTCCCTCCCCCATCGCTCCTTATGGAAGCTTTCAACAAAATACGGCCCCGTCATGCGCCTCCACCTCGGCTCCGTCCCGACCATCATAATCTCCTCCGCCGCTGCCGCACGAGACATGTTTAAGCTCCACGACCTCGCTTCTTGCAGCCGCCCTCCCTTATCCGGCAGCGGAAGATTGTCGTACAATTTCCTCGACATAAGTTTCTCCCCATACGGCGACCACTGGAGGGAGGTTCGAAAAATCTGCGTGCTTGAGCTGTTCAGCGTCAGGCGGGTGCAGTCGTTTCGGGGGGTCAGAGAACAAGAGGTGGGTCTGCTTATAAACTCCATCGCTCAATCCTCAACTTCCGGAGCTCTGGTGGATGTGAGCGAAAAATCGTATTCTCTGACCGCGAGTATAATTACGCGGGTTGCTTTTGGGAAGAGCTTCAGAGGGGGTGAATTAGATAATGAGAAGTTTGAAGAGGTTATCCGTAGAGCTTTGGTGGTAATGGGAAGCTTCTCGGCGACTGACTTTTTCCCAAGTTTTGGTTGGATTATTGATTGGATGAGTGGCGTTCGTGGGAGGTTGGAGAAGAGTTTTTTGGAGTTGGATTCTTTTTTTCAACATGTAATTGACCACCGCCTCAAATTTGGGGCGACTTGTGATGATGACAACAATATTTTGGATGTGTTGTTGAAGATGGAGAGAGAGCGCTCTGAATTTGATGCTCTGCAACTCACTAGAGACTGCATCAAGGCACTTACCATGGATATATTTATAGCCGGAGTGGACACGGGAGCCGGAACAATTGTTTGGGCCATGACAGAGCTGGCGAGGAATCCAAGGGTTATGAAAAAGCTACAAGACGAGATCCGAAGCTCCATAAAAGAAGAAGATCGAGTAGTGAAGGAGAGCCACCTCGAAAAGCTTGAATATCTAAAAATGGTGGTCAAAGAAGTTCTGAGGCTTCATCCGCCGGCCCCACTTCTCCTTCCACGAGAAACAATGTCCCATTTCAAGCTCGGCGGCTACGACATCGAACCCAAAGCCCATCTCCACGTCAATATTTGGGCCATCGGGCGGGACCCGGAATCGTGGACAGACCCGGATGAGTTCCTGCCGGAGAGATTCGTGGGAAGCAACATCGATTTCAGAGGGCAGAATTTTGAGCTGTTACCGTTCGGAGCTGGCCGGAGGAGCTGCCCGGGGATGCACATGGCCACCGTTGCGGTGGAGCTGGCGCTGGCTAATATGCTGCTGTGCTTTGATTGGAAATTGCCGCAAGGGATGAAAGAAGAAGATTTGGACATGGAAGAGGATGCTGGTCTGACGGTCACCAAGAAATCGCCTCTTCATCTTATTCCTGTCGAATACTTCAAATAA 1536 49.93 MHSLDQLMHTILLTLAIPLFLLLLLKTKTKFSTQKNKNQLPPSPPKLPLLGHLHLIGSLPHRSLWKLSTKYGPVMRLHLGSVPTIIISSAAAARDMFKLHDLASCSRPPLSGSGRLSYNFLDISFSPYGDHWREVRKICVLELFSVRRVQSFRGVREQEVGLLINSIAQSSTSGALVDVSEKSYSLTASIITRVAFGKSFRGGELDNEKFEEVIRRALVVMGSFSATDFFPSFGWIIDWMSGVRGRLEKSFLELDSFFQHVIDHRLKFGATCDDDNNILDVLLKMERERSEFDALQLTRDCIKALTMDIFIAGVDTGAGTIVWAMTELARNPRVMKKLQDEIRSSIKEEDRVVKESHLEKLEYLKMVVKEVLRLHPPAPLLLPRETMSHFKLGGYDIEPKAHLHVNIWAIGRDPESWTDPDEFLPERFVGSNIDFRGQNFELLPFGAGRRSCPGMHMATVAVELALANMLLCFDWKLPQGMKEEDLDMEEDAGLTVTKKSPLHLIPVEYFK 511
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 23233550 23236048 - MC09g_new0490 Mch9g2307 699189
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2307 511 Gene3D Cytochrome P450 26 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 FunFam Cytochrome P450 83B1 27 505 - -
Mch9g2307 511 Pfam Cytochrome P450 41 500 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 CDD CYP71-like 70 502 - -
Mch9g2307 511 PANTHER CYTOCHROME P450 71B11-RELATED 19 507 IPR050193 -
Mch9g2307 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch9g2307 511 SUPERFAMILY Cytochrome P450 41 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2307 511 Coils Coil 335 355 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1407 Mch-Chr3:16559625 Mch9g2307 Mch-Chr9:23233550 1.80E-138 dispersed
Mch6g0108 Mch-Chr6:639045 Mch9g2307 Mch-Chr9:23233550 1.40E-12 dispersed
Mch9g0532 Mch-Chr9:3921555 Mch9g2307 Mch-Chr9:23233550 8.26E-89 dispersed
Mch9g2304 Mch-Chr9:23226720 Mch9g2307 Mch-Chr9:23233550 0 dispersed
Mch9g2307 Mch-Chr9:23233550 Mch9g2309 Mch-Chr9:23243370 1.19E-257 dispersed
Mch9g2307 Mch-Chr9:23233550 Mch9g2308 Mch-Chr9:23238485 3.23E-248 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2307 - - - 0.0