Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2308 ATGGTGAGCCTTGATCAGAGAATGATGCAATATTTGCAAAGCTTAAGCCTTTCCATCTGGGATTTTGTTTCTCTGCTCTTGCTCTTGTCTTCTTCTCTAATCCTTTTTAACACTATAATAATGAAATTGGTTGCAACACACAAGAAGAAGAAGCAGCCTCCTCCGGGCCCTCCAAAGCTTCCATTATTGGGTCACTTGCACCTCCCCCACCGCTCTCTCAGGGATCTTTCGGCAAAATATGGCCCCGTCATGCTCCTCAAACTCGGCTCGGTCCCGACCATGGTCGTCTCCTCCGCCGCCGCCGCAAGAGACTTGTTTAAACTACACGACCTCGCTTCCTGCAGCCGCCCTCGCCTCGCCGCCAGCGGGAGGTTTTCGTACAACTTTCTAGACCTGAATCTATCCCCATATGGGGAGCGTTGGAGGGAGCTTCGGAAGATTTGCATGGTGGAGCTGTTCAGCGCCAGGAGGGTGCAGTCGTTTGAGAAGATAAGAGAAGAGGAGGTGGGGGTGCTGATAAACTCCATCTCTCAATCCGCAGCTTGGGGAAGTAGTCCAATTGATGTGAACGAGAAATCGTATTCTTTGACCGCGAGTATAACGACGCGGGTTGCGTTTGGGAAGACGTTCAGAGGGGGCGAGCTGGATGATGAGAATTTCCAACAGGTGATCCGCAGAGCGGTTGCTGCGTTGGGAAGCTTTTCGGCGAGTGACTTCTTTCCCGGCGTGGGGTGGATTGTTGATCGGGTGAGTGGCGTTCATGGGCGGCTGGAGAAAAGCTTTGCTGAGTTGGATGAATTTTTTCAACGTGTGGTGGATGATCGCGTCAACTTCAGGGAGACTCGTCGAAATCATGAAGAGAATATTGTTGATGTTTTGTTGAAAATGGAGAGGGATTGCTCCCAATCTGATACACTCAAATTCACCACAGATTGCATTAAGGCACTCATCATGGATATATTTCTAGCGGGAGTAGAAACGGGAGCAGGCATAATTGTTTGGGCTATGGCAGAGCTTGTGAGAAATCCAAGGGTGATGAAGAAGCTACAACATGAGATCAGAAGCTCCATAAAAGGAGATCAAGTGAAGGAGAGCGAGCTCGAAAAGCTCGAGTATCTAAAAATGGTGGTGAAAGAGGTTTTGAGGCTGCATCCACCGGCCACGCTTCTGCTTCCAAGAGAAACCATGTCCCATTTCGAGCTCAACGGATACGACATCGACCCCAAAGCCCATCTTCACGTGAACGTATGGGCCATTGGGCGAGACCCCGAGTGGTGGATTAACCCGGAGGAGTTCTCACCGGAGAGATTTATTGGAAGCAACGTTGATTACAGAGGGCAGAATTTCGAGTTATTGCCGTTCGGAGCTGGCCGGAGAATTTGTCCCGGGATGAATATGGGGACTCTTACGGTGGAGCTAGCGCTGGCTAATATGTTGCTGTGTTTTGATTGGAAACTGGCACAAGGAATGAAAGAAGAAGATGTAGACATGGAAGAGGATGCTGGTCTAACCACTGCAAAAAAATCACTTCTTAAACTTGTTCCACACCCACCTTAA 1557 49.39 MVSLDQRMMQYLQSLSLSIWDFVSLLLLLSSSLILFNTIIMKLVATHKKKKQPPPGPPKLPLLGHLHLPHRSLRDLSAKYGPVMLLKLGSVPTMVVSSAAAARDLFKLHDLASCSRPRLAASGRFSYNFLDLNLSPYGERWRELRKICMVELFSARRVQSFEKIREEEVGVLINSISQSAAWGSSPIDVNEKSYSLTASITTRVAFGKTFRGGELDDENFQQVIRRAVAALGSFSASDFFPGVGWIVDRVSGVHGRLEKSFAELDEFFQRVVDDRVNFRETRRNHEENIVDVLLKMERDCSQSDTLKFTTDCIKALIMDIFLAGVETGAGIIVWAMAELVRNPRVMKKLQHEIRSSIKGDQVKESELEKLEYLKMVVKEVLRLHPPATLLLPRETMSHFELNGYDIDPKAHLHVNVWAIGRDPEWWINPEEFSPERFIGSNVDYRGQNFELLPFGAGRRICPGMNMGTLTVELALANMLLCFDWKLAQGMKEEDVDMEEDAGLTTAKKSLLKLVPHPP 518
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 23238485 23241443 - MC09g_new0491 Mch9g2308 699190
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2308 518 CDD CYP71-like 79 511 - -
Mch9g2308 518 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch9g2308 518 PANTHER CYTOCHROME P450 71B11-RELATED 33 515 IPR050193 -
Mch9g2308 518 FunFam Cytochrome P450 83B1 39 514 - -
Mch9g2308 518 Gene3D Cytochrome P450 45 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 Pfam Cytochrome P450 54 508 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 SUPERFAMILY Cytochrome P450 54 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g2308 518 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g2302 Mch-Chr9:23219835 Mch9g2308 Mch-Chr9:23238485 3.64E-100 dispersed
Mch9g2305 Mch-Chr9:23231232 Mch9g2308 Mch-Chr9:23238485 3.72E-37 dispersed
Mch9g2308 Mch-Chr9:23238485 Mch9g2311 Mch-Chr9:23254798 7.08E-126 dispersed
Mch9g2307 Mch-Chr9:23233550 Mch9g2308 Mch-Chr9:23238485 3.23E-248 tandem
Mch9g2308 Mch-Chr9:23238485 Mch9g2309 Mch-Chr9:23243370 6.95E-254 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2308 - - - 0.0