Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g2309 | ATGGTTAGCCTTGATCAGATAATGCTGCTAATGCCCAGCATTTTAACGTGGGCAATTCCACTAATCTTCATCTTCTCTTTCACGCTCATTAAAACCGCAACACACAACAAAAAACAACACCCTCCAGGCCCTCCAAAGTTCCCTTTTCTGGGCCACTTGCACCTCCTCGGCCCCCTCCCCCACCGCTCCTTATGGAAGCTCTCAAACAAATACGGCCCCATCATGAGCCTCAAACTCGGCTCCGTCCCGACCATCGTAATCTCCTCCGCCGCGGCCGCAAGAGAGGTCCTGAAAGTGCACGACCTGGCCTGCTGCAGCCGCCCTCGCTTGACCGCGAGCAGAAGATTCTCCTACAACTTCCAAGACATTGGGCTGTCTCCATACAGCGACCACTGGAGGGAAGTGCGGAAAATCAGCGTGCTCGAGCTGTTCAGCGCCAAGCGGGTGCAGTCGTTTCACCAGACTAGAGAAGAAGAGATTGGCGTGTGGTTGAAGTCCATCTCTCAGTGCTTATATTCTGAAGTCGACGTGAGTGAGAAATCGTATTCTCTGACCGCGAGTATAATAACGCGGATTGCGTTTGGGAGGAGTTTTCGAGGGGGGGAGCTGGACGATGAGAATTTTCAAGGGGTTGTGCGTAGAGCAGTGGAGGCCATGGGGAGATTCCCGGCGAGTGACTTCTTTCCCGGCGTGGGGTGGATTGCCGATCGGGTGAGTGGCGTTCATGGGCGGCTGGAGAAAAGCTTTGCTGAGTTGGATGCGTTTTTCCAACGTGTAGTTGACGATCGTATCAACCGTAATTCCAACAATAATGAAGAAAATATCGTTGATGTTTTGTTGAAGATGGAGAGAGACCGCACTCAATCTGATGTTCTGCAACTTACTATAGATTGCATCAAGGCACTTATCATGAATATATTTCTAGCTGGAGTGGAAACTGGAGCCGGAACAATTGTTTGGGCCATGACAGAGCTGATTAAGAATCCAAGAGTGATGAAGAAGCTACAAGACGAGATCAGAAGCTCCATAAAAGAAGATCAAGTAGTGAAGGAGAGCCACCTCGAAAAGCTTGAATATCTAAAAATGGTGGTCAAAGAAGTTCTGAGGCTTCATCCGCCGGCCCCACTTCTCCTTCCAAGAGAAACCATCTCCCATTTCAAGCTCAGCGGATACGACATCCACCCCAAAACTCATATCCACGTCAATGTTTGGGCCATCGGGCGAGACCCGGAATCGTGGACCGCTCCGGATGAGTTCTTGCCGGAGAGATTCGTGGGAAGTGGCGTCGACTACAAAGGCCAGAATTTCGAGTTTTTGCCGTTCGGAGCTGGCCGGAGAATCTGTCCGGGGATGAATATGGCCACCGTCACGGTGGAACTGGCGCTGGCTAATTTGCTGATGTGTTTTGATTGGAAATTGCCGGACGGATTGAAAGAAGAACACGTGGACGTGGAAGAGGAAGCTGGTCTAACAGTTGCCAAGAAGTCGCTTCTTAAACTTGTTCCTCTCCCTTACTTTCAGATTTGA | 1527 | 50.43 | MVSLDQIMLLMPSILTWAIPLIFIFSFTLIKTATHNKKQHPPGPPKFPFLGHLHLLGPLPHRSLWKLSNKYGPIMSLKLGSVPTIVISSAAAAREVLKVHDLACCSRPRLTASRRFSYNFQDIGLSPYSDHWREVRKISVLELFSAKRVQSFHQTREEEIGVWLKSISQCLYSEVDVSEKSYSLTASIITRIAFGRSFRGGELDDENFQGVVRRAVEAMGRFPASDFFPGVGWIADRVSGVHGRLEKSFAELDAFFQRVVDDRINRNSNNNEENIVDVLLKMERDRTQSDVLQLTIDCIKALIMNIFLAGVETGAGTIVWAMTELIKNPRVMKKLQDEIRSSIKEDQVVKESHLEKLEYLKMVVKEVLRLHPPAPLLLPRETISHFKLSGYDIHPKTHIHVNVWAIGRDPESWTAPDEFLPERFVGSGVDYKGQNFEFLPFGAGRRICPGMNMATVTVELALANLLMCFDWKLPDGLKEEHVDVEEEAGLTVAKKSLLKLVPLPYFQI | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 23243370 | 23247403 | - | MC09g1818 | Mch9g2309 | 699191 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g2309 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch9g2309 | 508 | Pfam | Cytochrome P450 | 41 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PANTHER | CYTOCHROME P450 71B11-RELATED | 22 | 502 | IPR050193 | - | |
| Mch9g2309 | 508 | Gene3D | Cytochrome P450 | 26 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | E-class P450 group I signature | 92 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | E-class P450 group I signature | 184 | 202 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | E-class P450 group I signature | 402 | 426 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | P450 superfamily signature | 448 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | FunFam | Cytochrome P450 83B1 | 28 | 501 | - | - | |
| Mch9g2309 | 508 | SUPERFAMILY | Cytochrome P450 | 41 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g2309 | 508 | CDD | CYP71-like | 70 | 498 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch8g2877 | Mch-Chr8:31567119 | Mch9g2309 | Mch-Chr9:23243370 | 4.28E-109 | dispersed | |
| Mch9g2307 | Mch-Chr9:23233550 | Mch9g2309 | Mch-Chr9:23243370 | 1.19E-257 | dispersed | |
| Mch9g2309 | Mch-Chr9:23243370 | Mch9g2311 | Mch-Chr9:23254798 | 1.83E-134 | proximal | |
| Mch9g2308 | Mch-Chr9:23238485 | Mch9g2309 | Mch-Chr9:23243370 | 6.95E-254 | tandem |
Pathway information