Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2331 ATGGGGTTTCCTCGTTTTTTGGTTTTATTTCTCTTCGTCATTTCCTCTGTCGATTGCCAGGTTAAAGAGTTCGTCAGTTTAGACTGTGGAGGCACGAAGAACTACACCGACCCAGTTACCGGCCTGACATGGATTTCCGACGCCGAAATCATGAACGCCGGCAGCTCATTGCCAGTGGAAAACCCAAATGGAAACTCGATGCAGTACCAAACACGGAGGGACTTCCCAATCGATGACAAGAAGTACTGTTACACTTTGAGCACAGAGGAGAGGAGGAGGTATTTGGTTCGAGCGACTTTTCAATATGGGAGTTTGAGAAATGAAGAGACATACCCTAAATTTCAGCTCTATTTGGACGCAACCAAGTGGTCGACTGTTACGATTTTCGATGCTTCGAGAGTTTATGTGAAGGAGATGATCATCAGGGCACCTTCTGATTCCTTCGATGTGTGCATTTGTTGTGCGACAACTGGTTCTCCATTCATATCCACTCTCGAGCTCCGGCCCTTTAATCTTTCAATGTATGCAACTGATTTTGAAGATAATTTCTTCTTGGAAGTAGCTGCTAGAGTGAATTTTGGTGCTCTGACCAAAGATGTGATAAGGTACCCAGATGATCCATATGACAGAATTTGGGATTCAGATCTTGAGAAGAGGCAAAATTATCTTGTGGGGGTGGCTCCTGGAACAGAAAGAATCAGTACTTTGAACAACATTGATGTAATGACACGTGAGTATCCGCCGGTTAAGGTGATGCAAACTGCTGTTCTTGGTACAAAAGGGGTGCTCAGCTACAGGTTGAATTTGGATGACTTTCCTGCCAATGCCAGGGCTTATGCATACTTTGCTGAAATTGAAGATTTGGGTTCGAATGAGACTCGGAAGTTCAAATTGGAGGAACCGAACATCCCGGACTCTAGCAATGCAGTGGTGAATATTGCAGAGAATGCAAATGGGACCTATACTCTTTATGAACCGAGTTACATGAATGTGACACTGAGTTTCGTGCTTTCATTCTCCTTTGTTAAGACCCGAGATTCCACTCGAGGACCTCTGTTGAATGCATTGGAAATTAGTAGATATGTTGAGATTGCTGCCAAGACTGATAAGAGAGACGTGACTGTAATGAATGCCTTTCGTATCATGTCAAGGGAGAATGTTTGGACAAATGAAGGCGATCCTTGTGTTCCAACAAGCTGGGAATGGATGACCTGTACTGCCACGAATCCACCGAGAATAACTAAAATTGAGCTATCTAGAAAGAGCATCGAGGGTGAAATTCCATCCGAGATCAATACTATGGATGCGGTAACAGAATTGTGGTTAGATGGTAATTCCCTTGCAGGACCACTGCCTGACATGAGCAATCTAATGAACTTGAAGATTTTACATCTAGAGAATAACAATTTGACAGGGCCATTACCTTCTTACCTTGGTAGTTTGCCCAATTTACAGGAACTATACATTCAAAACAATACGTTTTCAGGTGAAATACCTCCAGAATTGTTGACAAGGAAACTCATCTTTAAGTACGACGGTAACCTGGGACTGCACAAAAGTAAACGATACGGGATGCATTCTAAGCTTATAATAGGAGTTTCATTGGGAGTGCTTGTGATTCTGTTCGTTGTACTTTTAGCAACTTTACTATTACTCCGAAAGCTTCGAAAAAGAACGACGCTGTATCAGAAAAGTAGTGGTTCTCTGCAAACCAGCACCAAGCGCTCAACTGCCTACTCGATCGGCAAGGGGGATGATGGCATTGCCTACTATATATCTCTCTCGGATCTGGAAGAGGCAACGAATAACTTCTCTAAGAAAATTGGTAAAGGCAGCTTCGGATCGGTCTGTTATGGGAAAATGAGAGATGGAAAAGAAGTGGCAGTTAAAATCATGGCGGAGTCATCTTCACATGGGAATCAGCAGTTTACGACTGAGGTCGCCCTCTTATCGAGAATTCATCACAGAAATTTGGTCCCTTTGATAGGGTACTGCGAAGAAGAACATCAACGAATTCTGGTTTACGAATATATGCATAATGGAACATTGCGAGATCATTTATATGGTTTTACCAATCAGAAGCGCTTGGACTGGCTTACTCGCTTGCACATTGCTGAAGATGCTGCTAAAGGGCTCGAATACTTGCACACAGGATGCAGTCCGAGTATCATTCATCGAGACGTAAAAACAAGCAACATCCTCCTCGACATCAATATGAGAGCCAAAGTTTCCGACTTTGGACTATCGAGGCAAGCGGAGGAAGATTTGACCCATGTATCAAGCGTCGCTCGAGGAACAGTAGGCTACTTGGATCCTGAGTACTATGCTTGTCAACAACTGACCGAAAAGAGCGACGTGTATAGTTTCGGTGTGGTTCTGCTGGAACTGATCTCCGGGAAGAAACCTGTATCACCAGAGGACTACGGTAGTGAATTGAATATTGTGCACTGGGCGAGGTCCCTAGTTCATAAAGGAGACGTGACGAGCATCATAGATCCATTTCTCGAAGGAAATGTGAAGATTGAATCTGTGTGGAGAATTGCTGAAGTTGCCATACAGTGTGTGCAGCAGCATGGAGTTTCTAGGCCAAGGATGCAGGAAGTCATCTTAGCCATACAAGATGCCATTAAGATTGAAAATGGTACTGAAGGAAACCAGAAACTCTCTTCAGGCAGTTCAAAAGCACAGTCATCCCGGAAAACTTTGCTCACCTCCTTTCTCGAAATCGAGAGCCCCGACTTGTCGCACGGTTCCCTCCTTCCCTCTGCGAGATAA 2775 44.04 MGFPRFLVLFLFVISSVDCQVKEFVSLDCGGTKNYTDPVTGLTWISDAEIMNAGSSLPVENPNGNSMQYQTRRDFPIDDKKYCYTLSTEERRRYLVRATFQYGSLRNEETYPKFQLYLDATKWSTVTIFDASRVYVKEMIIRAPSDSFDVCICCATTGSPFISTLELRPFNLSMYATDFEDNFFLEVAARVNFGALTKDVIRYPDDPYDRIWDSDLEKRQNYLVGVAPGTERISTLNNIDVMTREYPPVKVMQTAVLGTKGVLSYRLNLDDFPANARAYAYFAEIEDLGSNETRKFKLEEPNIPDSSNAVVNIAENANGTYTLYEPSYMNVTLSFVLSFSFVKTRDSTRGPLLNALEISRYVEIAAKTDKRDVTVMNAFRIMSRENVWTNEGDPCVPTSWEWMTCTATNPPRITKIELSRKSIEGEIPSEINTMDAVTELWLDGNSLAGPLPDMSNLMNLKILHLENNNLTGPLPSYLGSLPNLQELYIQNNTFSGEIPPELLTRKLIFKYDGNLGLHKSKRYGMHSKLIIGVSLGVLVILFVVLLATLLLLRKLRKRTTLYQKSSGSLQTSTKRSTAYSIGKGDDGIAYYISLSDLEEATNNFSKKIGKGSFGSVCYGKMRDGKEVAVKIMAESSSHGNQQFTTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTLRDHLYGFTNQKRLDWLTRLHIAEDAAKGLEYLHTGCSPSIIHRDVKTSNILLDINMRAKVSDFGLSRQAEEDLTHVSSVARGTVGYLDPEYYACQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGSELNIVHWARSLVHKGDVTSIIDPFLEGNVKIESVWRIAEVAIQCVQQHGVSRPRMQEVILAIQDAIKIENGTEGNQKLSSGSSKAQSSRKTLLTSFLEIESPDLSHGSLLPSAR 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23373781 23378588 - MC09g1839 Mch9g2331 699213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2331 924 Gene3D Transferase(Phosphotransferase) domain 1 678 896 - -
Mch9g2331 924 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 407 502 - -
Mch9g2331 924 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 678 885 - -
Mch9g2331 924 CDD STKc_IRAK 608 869 - -
Mch9g2331 924 Pfam Malectin-like domain 27 359 IPR024788 -
Mch9g2331 924 ProSiteProfiles Protein kinase domain profile. 602 876 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2331 924 Gene3D Ribonuclease Inhibitor 374 514 IPR032675 -
Mch9g2331 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g2331 924 SUPERFAMILY Protein kinase-like (PK-like) 589 870 IPR011009 -
Mch9g2331 924 Gene3D Phosphorylase Kinase; domain 1 585 677 - -
Mch9g2331 924 PANTHER OS07G0107800 PROTEIN-RELATED 454 879 - -
Mch9g2331 924 SUPERFAMILY L domain-like 395 502 - -
Mch9g2331 924 ProSitePatterns Protein kinases ATP-binding region signature. 608 630 IPR017441 GO:0005524(InterPro)
Mch9g2331 924 Pfam Leucine Rich Repeat 483 502 IPR001611 GO:0005515(InterPro)
Mch9g2331 924 Pfam Leucine Rich Repeat 459 481 IPR001611 GO:0005515(InterPro)
Mch9g2331 924 SMART serkin_6 602 876 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g2331 924 FunFam serine/threonine-protein kinase PBS1-like 570 677 - -
Mch9g2331 924 Pfam Protein tyrosine and serine/threonine kinase 604 869 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1145 Mch-Chr11:8045229 Mch9g2331 Mch-Chr9:23373781 4.19E-74 dispersed
Mch5g1787 Mch-Chr5:18308849 Mch9g2331 Mch-Chr9:23373781 5.52E-295 dispersed
Mch9g0088 Mch-Chr9:729073 Mch9g2331 Mch-Chr9:23373781 7.03E-118 dispersed
Mch9g1468 Mch-Chr9:17112653 Mch9g2331 Mch-Chr9:23373781 1.01E-64 dispersed
Mch9g1937 Mch-Chr9:20851598 Mch9g2331 Mch-Chr9:23373781 1.73E-66 dispersed
Mch9g2331 Mch-Chr9:23373781 Mch4g2421 Mch-Chr4:25193825 1.06E-74 dispersed
Mch9g2331 Mch-Chr9:23373781 Mch9g0294 Mch-Chr9:2188377 2.59E-96 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77724 PF12819 Malectin_like 7.90E-88 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2331 - - - 0.0