Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2341 ATGGAAGAAGAGATCGGAGCAGAGTTCAAGAGGAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCAAGAAATGTCTCACGTTCTGTGTTAATTACAATCTAAAGCCTTCGGATATAGTTTCTAGCTGGGAAGTTTACTATCTCAACAGGCAATTAGATGGGTCAGTGGTACAGATTTCACAGATGGATGGATTTTTACAACATTTACAAAATGAGCAAAAACAAGCAGTCATTAAAGGGGAACCGGATCTTCATATTTATTCGAGCAAAGATGTGGACATGATTTTGAATGACGAGGATGAAGATACAAACGAAGACATTCTTAAAACTCCAAATGGGAAATCTCAGAGCCTCCACAAGGAGCGATTTGACTCAACACCTTACACAAATGAAGGCTTGTTCTCTTCGGGGAAGCCTTCAAAGCATGTGACACCCTTCGGCCAAAGAAGAGAAAAATTTGTTGTGAGGTTCAGCATTAATGGCGTGCCTGATAACGAGACTCCTGAAAAGGAAGATAATTGCGAGAATGATGAGGATGCAATCATCAAGAAGGTTCAACCCCTACAAGGATGCTCCTTGACAGTCCTTGGATCAGGATCTGGACTTGAAGACAATTTCAGGTTCATGCATGACAAGGTTGAAGATAGGTCTAATGCTCTTGATAACCGAATCATGAAGTATGCCAAAGCTCTTTCTGCATCTGGGCAATATGAGGAAGCAGTGGACCCTACAGCGGCTTCGCAGAAAAGCATGTTTGCAGTAGGCATGATCTGTTGTGATGGTGAAGGACACTTAAACGATAAGTCCACCTTGTTACAATGCAGTTTTGAGCATTCAGGGGGGCAGCGAGTTCGTCTAGAATTACAAAACTTAAACCAGTTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCATCCAAACTTGTAGATTATTTTCCTTTGTCTGCCACTGTTGACCCCATTCTACCTCCAGCAAAGAAGAGAGCTTTGAACCATGATATCCAGCCAATGGATCAATCTTCTACACAGTCAAAATTATCAATGATTATTGCATCAGGCCCCTATACAACAACAGACAACTTATTGTTTGAGCCGTTGACAGAGTTATTAGCATATGCAAGAAGGAAGCTTCCTCAGCTACTAATATTGCTTGGGCCATTTGTTGATTCTGAGCATTCTGATATCAAGAGAGGAATTGTAGAGATGAGCTTGGAGGAACTTTTTAACTTTGAAATTCTCAGAAGGGTGCAAGATTATGCAGAACACATGGGTCCTGATGCACGTGTACTGTTGATGCCATCTGTAAGGGATGCTAATCATGCCGAAGTTTTCCCTCAGCCTGCTTTTGACATTCCATCTGAACTTAAACTTCAGATTTCCTGTCTCCCAAACCCAGGCATTCTGGAAGCAAATCAGGTAAAGATAGCCTGCTGCACGACGGATATTCTCAGACACCTTAGTGGAGAAGAACTGTCGAGAAACCTAACCAAGGGATCAACCAATGACCGTCTGAGCACACTTGCAAGTCATATACTTCGCCAGCGAAGGCATGTTTTATGTTGGACACAAGAATGTTGGATATCCAACGTATTAATATACTTTTATCCTCTATACCCTCCAGCCGAAGGAGTTCCACTGGACTTTTCACTTGCCGCAGAAGCTCTTGACATCTCTGTAATACCCGATATTCTTATTCTTCCATCCGACATGAAACACTTCGTGAAGGTTATATCCCTTGGTGAAGGAGGATCAGAGGAAGAGCGAGCGAGCTGCGTATGTGTGAATCCCGGAAGACTGGCCAAGGGCGAAGGAGGGGGCACTTTTGTAGAGCTTAGTTACTTTGGTGCGCCGGACCAGATAAATGCTGCAGTTGTCAGCATATGA 1920 43.18 MEEEIGAEFKRSGFTFDEEEEILKKCLTFCVNYNLKPSDIVSSWEVYYLNRQLDGSVVQISQMDGFLQHLQNEQKQAVIKGEPDLHIYSSKDVDMILNDEDEDTNEDILKTPNGKSQSLHKERFDSTPYTNEGLFSSGKPSKHVTPFGQRREKFVVRFSINGVPDNETPEKEDNCENDEDAIIKKVQPLQGCSLTVLGSGSGLEDNFRFMHDKVEDRSNALDNRIMKYAKALSASGQYEEAVDPTAASQKSMFAVGMICCDGEGHLNDKSTLLQCSFEHSGGQRVRLELQNLNQFSIFPGQVVGIEGHNPSGHCLIASKLVDYFPLSATVDPILPPAKKRALNHDIQPMDQSSTQSKLSMIIASGPYTTTDNLLFEPLTELLAYARRKLPQLLILLGPFVDSEHSDIKRGIVEMSLEELFNFEILRRVQDYAEHMGPDARVLLMPSVRDANHAEVFPQPAFDIPSELKLQISCLPNPGILEANQVKIACCTTDILRHLSGEELSRNLTKGSTNDRLSTLASHILRQRRHVLCWTQECWISNVLIYFYPLYPPAEGVPLDFSLAAEALDISVIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGGGTFVELSYFGAPDQINAAVVSI 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23429332 23435124 + MC09g1848 Mch9g2341 699223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2341 639 Gene3D - 340 514 - -
Mch9g2341 639 Gene3D - 545 635 - -
Mch9g2341 639 Gene3D - 1 77 IPR043034 -
Mch9g2341 639 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 2 625 IPR016722 GO:0005658(PANTHER)|GO:0006270(PANTHER)
Mch9g2341 639 FunFam DNA polymerase alpha subunit B 1 74 - -
Mch9g2341 639 Pfam DNA polymerase alpha/epsilon subunit B 361 587 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Mch9g2341 639 Pfam DNA polymerase alpha subunit B, OB domain 218 321 IPR054300 -
Mch9g2341 639 PIRSF DNA_pol_alpha_2 1 630 IPR016722 -
Mch9g2341 639 FunFam DNA polymerase alpha subunit B 341 505 - -
Mch9g2341 639 Pfam DNA polymerase alpha subunit B N-terminal 3 51 IPR013627 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2341 K02321 - csv:101206268 1075.08