Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2370 ATGGCTTCGGCTTGTGCTTCCTCCGCCATTGCCGCCGTCGCAATCTCTTCATCCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTGTAATTTCGTAACGGGGAAGAAGCTGAGGCTGAGAAAGTACACGGCAGCTGCCGTTGCTCCTCGGTCGGCTACGGTGTGCGCCGCTGCCGACCCCAACAGACCTCTCTGGTTCCCCGGCAGCACCCCTCCTCCATGGCTCGATGGCAGCCTCCCCGGTGACTTTGGCTTCGATCCTCTTGGTCTTTCTTCTGATCCGGAGAGCCTGAGATGGAACCAGCAGGCGGAGCTGGTGCACTGCCGGTGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTCTTGACGAAGATCGGAATTTTGAACACTCCGTCGTGGTACTCGGCCGGAGAATTGGAATACTTCACCGACACCACCACGCTCTTCGTGGTGGAACTCATTTTCATCGGTTGGGCCGAGGGCAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTGACCGGAACCGACGTCGGGTACCCGGGCGGACTCTGGTTCGACCCGCTCGGATGGGGCAGCGGTTCCCCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATCAAGAACGGGCGGTTGGCGATGTTGGCGGTCATGGGCGCGTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTTTTTGCCCACCTCGCCGACCCCGGCCACGCCACCGTCTTCGCCGCTTTCACACCCAAGTGA 804 59.7 MASACASSAIAAVAISSSSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23612786 23614925 + MC09g1871 Mch9g2370 699252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2370 267 Gene3D Chlorophyll a/b binding protein domain 72 257 - -
Mch9g2370 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 262 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Mch9g2370 267 Pfam Chlorophyll A-B binding protein 71 237 IPR022796 -
Mch9g2370 267 FunFam Chlorophyll a-b binding protein, chloroplastic 72 257 - -
Mch9g2370 267 SUPERFAMILY Chlorophyll a-b binding protein 58 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1735 Mch-Chr3:18781206 Mch9g2370 Mch-Chr9:23612786 7.50E-75 dispersed
Mch4g2062 Mch-Chr4:22844328 Mch9g2370 Mch-Chr9:23612786 4.25E-44 dispersed
Mch6g0991 Mch-Chr6:6967593 Mch9g2370 Mch-Chr9:23612786 2.10E-107 dispersed
Mch8g0688 Mch-Chr8:4936327 Mch9g2370 Mch-Chr9:23612786 1.69E-60 dispersed
Mch8g2102 Mch-Chr8:24052749 Mch9g2370 Mch-Chr9:23612786 3.80E-37 dispersed
Mch9g2370 Mch-Chr9:23612786 Mch6g0241 Mch-Chr6:1588441 5.08E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2370 K08908 - csv:101214055 509.605