Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g2395 ATGAGCACGGAACCTGAAAGCTTCCGTGTCTCTCCTCTCCCCCATCCCGTGCCCTCTCCATCCCTTCCCTTCTGCTTGTCATCGATTTCGATTGAATTTAGTCTTTCGAGCTTTTTGTCGATTGGATTGAGTTTCTCTATCTCTACAATAGCTTGGAGGAGAGAGGACAGGGACATGGAGACTCACTTTAATCACAATCTATTTGACAGGCGACCCATTCTGAAGAACAAGACTCCTGCTGTCAAATGGATCAAAGAATGGGTCCCTCAAGATGTTGTTGCAACTGGAGGAAAGTGCTTTCTTTTGAAATGGGTTACAGAGGATACCTTGAAGGCATTAAAGGAAAAGGCAAAACAGTCTGAGGCACCCGAACCTGAACCAGAACCAACCACTGAAGTGCTTTTCCTTTGTAGTTACGAGGGCTGTGGAAAAACATTTATTGATGCAGGTGCCTTGAGGAAGCATTCTCACATTCATGGGGAGAGACAATATGTTTGTCACTATGAAGGCTGTGGAAAGAAATTTTTGGATAGTTCGAAGTTGAAAAGACACTTTCTTATTCATACTGGTGAAAGAGATTTTGTGTGTCCTCATGAAGGCTGCGGTAAGGCATTTTCCCTTGATTTCAACTTGAGATCGCATATGAAAACGCATTCACAAGAAAACTATCATATCTGTCCATACCCTGATTGTGGAAAGAGATTTGCCCACGAGTACAAATTGAAGAACCACATTACGTCTCACCATGAAAAGAATGTGCCGGCTGAAGTGGTGAAGTATACACCACCTTCTGAGAAGCAAATTAAGGTTTCTAAACCTTCTGGAGGAGCTTACGCATCTGCATCGTCAGATCGCCCATACGGTTGTCCATACGAAGGGTGTGAAAAGGCTTACATCCATGAATACAAGCTCAAACTCCATCTGAGAAGAGAGCATCCTGGACATCTGGTAGAAGACAATGGCAATGCTCCAAATAATGGGGAAAATGAGATAGATGCCAGTGATCAAGATGGGTATGGTGGAAAACGGGTAAATAAGAACCAGAAACAGAACAAGCCTAAACCAAACTTGAAGTTACCACCTTCAAAAATATCACAGCGAAAAGGCACAACCCCATCTCCTGCCCCTATAAGTGCAGTTAAAAAATCATGGCCAGTTAAAGAAGAAACATACGAGGAAGAAGATAGCGAAGAAACAGAGGAGGACCGTGATAACGTGGACGAGGGTTGGAGATATGCAGAAAATGAAGATGATGATGAGGAAACAGAGTACGAAGATTGA 1281 43.25 MSTEPESFRVSPLPHPVPSPSLPFCLSSISIEFSLSSFLSIGLSFSISTIAWRREDRDMETHFNHNLFDRRPILKNKTPAVKWIKEWVPQDVVATGGKCFLLKWVTEDTLKALKEKAKQSEAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQYVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRFAHEYKLKNHITSHHEKNVPAEVVKYTPPSEKQIKVSKPSGGAYASASSDRPYGCPYEGCEKAYIHEYKLKLHLRREHPGHLVEDNGNAPNNGENEIDASDQDGYGGKRVNKNQKQNKPKPNLKLPPSKISQRKGTTPSPAPISAVKKSWPVKEETYEEEDSEETEEDRDNVDEGWRYAENEDDDEETEYED 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23726119 23730793 - MC09g1896 Mch9g2395 699277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g2395 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 287 314 IPR013087 -
Mch9g2395 426 MobiDBLite consensus disorder prediction 341 355 - -
Mch9g2395 426 FunFam zinc finger transcription factor YY1 221 252 - -
Mch9g2395 426 SUPERFAMILY beta-beta-alpha zinc fingers 138 188 IPR036236 -
Mch9g2395 426 Gene3D Classic Zinc Finger 220 249 - -
Mch9g2395 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 164 193 IPR013087 -
Mch9g2395 426 FunFam zinc finger transcription factor YY1 135 160 - -
Mch9g2395 426 ProSitePatterns Zinc finger C2H2 type domain signature. 137 159 IPR013087 -
Mch9g2395 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 135 164 IPR013087 -
Mch9g2395 426 FunFam Zinc finger protein 410 192 219 - -
Mch9g2395 426 FunFam Zinc finger transcription factor YY1 262 329 - -
Mch9g2395 426 SUPERFAMILY beta-beta-alpha zinc fingers 175 228 IPR036236 -
Mch9g2395 426 SUPERFAMILY beta-beta-alpha zinc fingers 218 251 IPR036236 -
Mch9g2395 426 Gene3D Classic Zinc Finger 161 191 - -
Mch9g2395 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 194 223 IPR013087 -
Mch9g2395 426 ProSitePatterns Zinc finger C2H2 type domain signature. 166 188 IPR013087 -
Mch9g2395 426 MobiDBLite consensus disorder prediction 314 426 - -
Mch9g2395 426 SUPERFAMILY beta-beta-alpha zinc fingers 282 310 IPR036236 -
Mch9g2395 426 MobiDBLite consensus disorder prediction 411 426 - -
Mch9g2395 426 MobiDBLite consensus disorder prediction 264 285 - -
Mch9g2395 426 ProSitePatterns Zinc finger C2H2 type domain signature. 196 218 IPR013087 -
Mch9g2395 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 224 254 IPR013087 -
Mch9g2395 426 FunFam Putative zinc finger protein 143 161 191 - -
Mch9g2395 426 ProSitePatterns Zinc finger C2H2 type domain signature. 226 249 IPR013087 -
Mch9g2395 426 Gene3D Classic Zinc Finger 192 219 - -
Mch9g2395 426 Gene3D Classic Zinc Finger 135 160 - -
Mch9g2395 426 MobiDBLite consensus disorder prediction 363 377 - -
Mch9g2395 426 ProSitePatterns Zinc finger C2H2 type domain signature. 289 312 IPR013087 -
Mch9g2395 426 Pfam Zinc finger, C2H2 type 194 218 IPR013087 -
Mch9g2395 426 Pfam Zinc finger, C2H2 type 137 159 IPR013087 -
Mch9g2395 426 Pfam Zinc finger, C2H2 type 224 248 IPR013087 -
Mch9g2395 426 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 68 348 - GO:0000790(PANTHER)|GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0005667(PANTHER)|GO:0006357(PANTHER)|GO:0031519(PANTHER)
Mch9g2395 426 Gene3D Classic Zinc Finger 261 326 - -
Mch9g2395 426 SMART c2h2final6 224 248 IPR013087 -
Mch9g2395 426 SMART c2h2final6 287 312 IPR013087 -
Mch9g2395 426 SMART c2h2final6 135 159 IPR013087 -
Mch9g2395 426 SMART c2h2final6 194 218 IPR013087 -
Mch9g2395 426 SMART c2h2final6 164 188 IPR013087 -
Mch9g2395 426 MobiDBLite consensus disorder prediction 390 404 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44137 PF00096 zf-C2H2 0.0059 CL0361 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g2395 - - - 0.0