Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0073 ATGGCCAACGATAGACGCTTAGAAGCTTGGAATTTCATCAAACAGATAGCACAAGGCCGATGGTTCTCTGTATTCGCTTCGTTTCTTATAATGATTGGCTGTGGAACGACATACATTTACGGAACATACTCGAAAGTGATCAAGACCCAATTCGATTACAGCCAAACACAAATCAACATGCTGGGATTCGCCAAAGATCTCGGCTCAAACGCAGGTATCTTCGTCGGTCTTTTTGCCGAGGTGGCACCGCTGTGGGCTCTCTTCCTCGCGGGCGCGATACTCAACTTCACGAGCTACTTCATGATTTGGCTCTCCATTACTCGCCGCATTGCTAAGCCTCAGTTCTGGCAAATGTTTCTTTACATTTCCATGGCTACAAATGCTGCCAATTTCTCTAACACAGCCATTTTGGTCACCAGTGTTAGAAACTTCCCTGAGCGAAGAGGTATCATTTTGGGGCTTCTTAAAGGCTTTGTGGGCATTTCTGGTGGAGTCTTAACCCAGTTTTATTTAGCCATTTATGGCCATGAAGATCCATCTAATATTGTACTTCTTTTTTCTTGGTTGCCCTCTGTCATAATTTTGGTGTCTTTCATGTCAGTTCGGCCGATTAATATCCGTAAACATCCCGAAGAGCTTAAGGTTTTTTATCACTTGTTATACGTTTCCATTCTTCTTGCACTTTTCATTCTGTTTTTGACCATTGCGCAAAAGCAAGCCAAGTTCTCTCACGCAGGCTACGCAAGTGGCGCAGCTGTTGTCGTTGGCTTGCTCTGCCTTCCCCTTTTGATCGCGTTTAGGGAAGAGTTCTTGCTCTACAAACAAAATGACGCGAATTCGTCTGTCTCAGTTTCGATTATTGAACCGAAGTCTGTCAAAAAATCAACTCCCATATTGGAGGAAATTGCTGAGTTTTCGTCGGCATCGTCGGCATCGTGTTTTGCGACCATAACGAACAAGCCTCCTAGAGGGGAGGATTTCACCATATTGCAAGCTATCTTCAGCAAAGACATGGCTCTTATTTGTTTAGCTATGTTTTCAGGGGGTGGGTCTTCTCTTGCTTCCATTGATAATTTCGGCCAAATTGGTGAATCACTTGGCTACCCACAACAAGCCACGAGTATCTTTGTTTCTTGGGTCTCGATTTTCAATTTCTTCGGCCGAGTTTTCTCTGGCTTTGTCTCAGAGACCTTCATGGTCAAATACAAATTACCTCGTCCCATAATCCTTGCCTTTTCCTATCTTTTAACTTGCATTGGCCAACTCTGTATCGCGTATCCAATGCCTGGTTCGGTCTATGCAGCTTCGTTGATTATCGGGTTTGGATTTGGAGCGCAAGGTCCATTGTTATTCGCCATAATCTCTGAGCTTTTCGGGATCAAACATTTCTCAGTGTTGTTCAATTGGGGACAGTTGGTAGCCCCATTTGGATCTTACATACTAAATGTTGATGTAGTGGGGAAGTTCTATGACATGGAAGCTTTAAGTGAAGGAAAGAATAAGGCAACCGGAAAGGGGATAAATTGCATGGGAGCTCATTGCTTTAGTGGCTCTTTCACAATCTTGGCATTCGCCACATTGATTGGTTCGTTAGCTATGCTCTTGTTGGCTTACCAGACTCAAGAATTTTACAAAGGCGATGTTTATAAGAACTACAAAGAAGACTTGTGGATTCCTCCATCTGAAATGGAGTTTTATCGTTTAGATAACAAGAAGAAAGACATTGACGATGACGACTAA 1740 43.33 MANDRRLEAWNFIKQIAQGRWFSVFASFLIMIGCGTTYIYGTYSKVIKTQFDYSQTQINMLGFAKDLGSNAGIFVGLFAEVAPLWALFLAGAILNFTSYFMIWLSITRRIAKPQFWQMFLYISMATNAANFSNTAILVTSVRNFPERRGIILGLLKGFVGISGGVLTQFYLAIYGHEDPSNIVLLFSWLPSVIILVSFMSVRPINIRKHPEELKVFYHLLYVSILLALFILFLTIAQKQAKFSHAGYASGAAVVVGLLCLPLLIAFREEFLLYKQNDANSSVSVSIIEPKSVKKSTPILEEIAEFSSASSASCFATITNKPPRGEDFTILQAIFSKDMALICLAMFSGGGSSLASIDNFGQIGESLGYPQQATSIFVSWVSIFNFFGRVFSGFVSETFMVKYKLPRPIILAFSYLLTCIGQLCIAYPMPGSVYAASLIIGFGFGAQGPLLFAIISELFGIKHFSVLFNWGQLVAPFGSYILNVDVVGKFYDMEALSEGKNKATGKGINCMGAHCFSGSFTILAFATLIGSLAMLLLAYQTQEFYKGDVYKNYKEDLWIPPSEMEFYRLDNKKKDIDDDD 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 720012 721751 + Sed0020759.1 Sed01g0073 699377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0073 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 551 - GO:0016020(PANTHER)
Sed01g0073 579 Pfam Nodulin-like 20 265 IPR010658 -
Sed01g0073 579 SUPERFAMILY MFS general substrate transporter 23 542 IPR036259 -
Sed01g0073 579 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Sed01g0073 579 Gene3D MFS general substrate transporter like domains 337 545 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0073 Sed-Chr1:720012 Sed05g3355 Sed-Chr5:42814985 1.80E-218 dispersed
Sed03g2390 Sed-Chr3:20248765 Sed01g0073 Sed-Chr1:720012 5.60E-166 transposed
Sed03g2412 Sed-Chr3:20738602 Sed01g0073 Sed-Chr1:720012 1.20E-168 transposed
Sed07g2019 Sed-Chr7:35121868 Sed01g0073 Sed-Chr1:720012 4.60E-235 transposed
Sed11g0380 Sed-Chr11:3637781 Sed01g0073 Sed-Chr1:720012 7.60E-198 transposed
Sed11g0668 Sed-Chr11:9043730 Sed01g0073 Sed-Chr1:720012 3.70E-229 transposed
Sed13g2079 Sed-Chr13:25557416 Sed01g0073 Sed-Chr1:720012 5.80E-230 transposed
Sed01g0073 Sed-Chr1:720012 Sed05g3354 Sed-Chr5:42811066 1.10E-212 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0073 - - - 0.0