Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0204 ATGGGTTCCTTAAAAGCGCCGCCGTCGACGACGGTGCTGAAGTGGCTGGGATTCGTGTCCGCCGTGTGGGTCCAGGCGATTTCGGGCAACAACTACACGTTTTCGAATTACTCGGACGCGCTGAAGTCGCTGATGAATCTGACTCAGCTGGAGCTGAACAATCTCTCCGTCGCGAAAGACGTCGGAAAAGCGTTCGGACTCGTGGCCGGAATCGCCTGCGACCGGTTTCCGACGTGGCTGATTTTGCTGATCGGATCTCTGGAAGGTCTTCTTGGCTATGGCGCTCAGTGGCTGGTTGTTAGCCAGAGAATTTCCCCTCTTCCTTACTGGCAGATGTGCATATTTTTATGTATGGGCGGAAACAGCACAACATGGATGAACACGGCGGTGCTGGTCACCTGCATCAGAAACTTCCGGCGGAATCGCGGCCCTGTTTCCGGCATCCTCAAGGGCTACGTCGGCCTCAGCACCGCCATCTTCACCGATCTCTGCTCCGCTCTGTTTTCCGACGACCCCTCTTCCTTCCTCGTCATGCTCTCCGTCGTCCCCTTCGCCGTCTGCCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCGACCACCCCCTCCGCCGCCGCCTCCGCCGCCGAAGAGGAATCCAACTTCTTCGCCGTCTTCAACGCCCTCGCCGTCGTCGTCGCCGTCTATCTCATAACCTACGATTTCATCAAAAACTCCCCCGCCGTCGTCTCCCAATTGTTCTCAATCGGACTGTTGATCCTCCTCGGATCCCCTTTAATCATTCCGATTTACTCGTTCTTCAAATCCCGGCGTCGGGCCGGGTCGGATCTGGAGTCCCGGGTTGAGGAACCGTTGCTGAAGGAGGAGGCGGTGGTGAAGGAGGAGGAAGTTGCGGCGGTGCAGGAGGAGGAGGTGGGAGTAGCGGCGGCGCCGGTGATCGGAGAAGAGCACACGATTGTCCAGGCGGTGAAGACGGTGGATTTCTGGGTTTTGTTCGTGTCGTTTCTGTGTGGGGTCGGAACTGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCGCTTGGCTACGCCGACGTTTCCATGTTCGTTTCTCTTACCAGTATTTGGGGATTTTTCGGCCGGATTCTCGCCGGAACCGTTTCCGAGCATTTTCTCAAAAAATCAGGAACACCAAGGCCTTTATGGAACGCAGCATCTCAAATTCTAATGACCGTTGGCTACATTCTATTGGCGATGGCAATGCCGGGGTCCCTCTACATCGGCTCGGTCATCGTCGGTATCTGCTACGGCGTACGTCTCTCTGTCACCGTCCCCACCGCCTCTGAGCTCTTCGGTCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCCATTGGCTCCTTCCTCTTCTCGGGCCTCCTCGCCGGGTACCTCTACGACAGGGAAGCAACCCCGACCGAAGGTGGTGGCAACACGTGCATCGGCGGGCATTGCTACAGAATCGTGTTCATAGTCATGGCTGCAGCTTGTGTCATTGGGTTTGTTTTGGATATTTGGTTGGCGTTTAGAACCAAATCGCTTTATTCGAAGCTCAAAGCTAACAAGAAATCAAAGAAGGGAAGCAACAACAGTTCGTAG 1638 55.31 MGSLKAPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDALKSLMNLTQLELNNLSVAKDVGKAFGLVAGIACDRFPTWLILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFSDDPSSFLVMLSVVPFAVCLFAMFFLREIPPPTTPSAAASAAEEESNFFAVFNALAVVVAVYLITYDFIKNSPAVVSQLFSIGLLILLGSPLIIPIYSFFKSRRRAGSDLESRVEEPLLKEEAVVKEEEVAAVQEEEVGVAAAPVIGEEHTIVQAVKTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLTSIWGFFGRILAGTVSEHFLKKSGTPRPLWNAASQILMTVGYILLAMAMPGSLYIGSVIVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGYLYDREATPTEGGGNTCIGGHCYRIVFIVMAAACVIGFVLDIWLAFRTKSLYSKLKANKKSKKGSNNSS 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1615772 1620556 - Sed0014298.1 Sed01g0204 699508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0204 545 CDD MFS_Mch1p_like 13 513 - -
Sed01g0204 545 Pfam Nodulin-like 14 264 IPR010658 -
Sed01g0204 545 SUPERFAMILY MFS general substrate transporter 58 526 IPR036259 -
Sed01g0204 545 Gene3D MFS general substrate transporter like domains 325 544 IPR036259 -
Sed01g0204 545 Gene3D MFS general substrate transporter like domains 16 277 IPR036259 -
Sed01g0204 545 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 531 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0204 Sed-Chr1:1615772 Sed03g0723 Sed-Chr3:4360226 1.50E-89 dispersed
Sed01g0204 Sed-Chr1:1615772 Sed05g1417 Sed-Chr5:27577275 1.00E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0204 - - - 0.0